Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC024651.2-201ENST00000562480 2098 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC016583.1-201ENST00000624221 2431 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC073429.2-201ENST00000569694 1444 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC109446.4-201ENST00000623235 2755 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 MTCO1P6-201ENST00000481192 1384 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC025263.3-201ENST00000622965 1396 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC020633.1-201ENST00000468439 2247 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL6A2P12110 RNU6-931P-201ENST00000363850 107 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL6A2P12110 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 OR5H15-201ENST00000383696 930 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RNU6-1200P-201ENST00000384162 107 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RNU6-244P-201ENST00000391028 104 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.09□□□□□ -1.43
COL6A2P12110 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 REREP1Y-201ENST00000422655 198 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 ATP5F1P1-201ENST00000433775 569 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC234064.1-201ENST00000436312 247 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 REREP2Y-201ENST00000439103 200 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 RPL23AP76-201ENST00000441860 458 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AL929288.2-201ENST00000446368 407 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AL162739.1-201ENST00000450606 307 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 snoU13.29-201ENST00000459370 104 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC110749.1-201ENST00000462007 357 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RPL7P18-201ENST00000478965 734 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RN7SL267P-201ENST00000485107 261 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RPL23AP40-201ENST00000487630 390 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 ARL4AP1-201ENST00000503220 705 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 DSTNP2-201ENST00000504533 515 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC113191.1-201ENST00000517759 403 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 NDUFA5P2-201ENST00000519723 344 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC131935.1-201ENST00000524621 333 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC105233.3-201ENST00000531125 744 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC025260.1-201ENST00000548858 430 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 RSL24D1P11-201ENST00000591045 491 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC073544.2-201ENST00000601155 540 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 AL592221.1-201ENST00000605266 382 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.09□□□□□ -1.43
COL6A2P12110 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
COL6A2P12110 AC025470.1-201ENST00000510053 2032 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
COL6A2P12110 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 MT-RNR2-201ENST00000387347 1559 ntBASIC6.09□□□□□ -1.43
COL6A2P12110 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL6A2P12110 AP000473.2-201ENST00000602659 1537 ntBASIC6.09□□□□□ -1.44
COL6A2P12110 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL6A2P12110 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL6A2P12110 NCLP2-201ENST00000416078 1462 ntBASIC6.09□□□□□ -1.44
COL6A2P12110 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
COL6A2P12110 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL6A2P12110 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
COL6A2P12110 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms