Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NDUFB4P8-201ENST00000435351 367 ntBASIC5.3□□□□□ -1.56
PCNAP12004 FMO7P-201ENST00000436045 768 ntBASIC5.3□□□□□ -1.56
PCNAP12004 SUMO2P3-201ENST00000438311 288 ntBASIC5.3□□□□□ -1.56
PCNAP12004 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 AL358876.1-201ENST00000453364 1075 ntBASIC5.3□□□□□ -1.56
PCNAP12004 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 AC069277.2-201ENST00000454211 432 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC018635.1-201ENST00000468292 1030 ntBASIC5.3□□□□□ -1.56
PCNAP12004 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
PCNAP12004 AC007998.1-201ENST00000474156 672 ntBASIC5.3□□□□□ -1.56
PCNAP12004 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.3□□□□□ -1.56
PCNAP12004 AC116562.1-201ENST00000485355 781 ntBASIC5.3□□□□□ -1.56
PCNAP12004 RN7SL591P-201ENST00000496150 292 ntBASIC5.3□□□□□ -1.56
PCNAP12004 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.3□□□□□ -1.56
PCNAP12004 LSM3P2-201ENST00000551246 273 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 SETP1-201ENST00000556014 845 ntBASIC5.3□□□□□ -1.56
PCNAP12004 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.3□□□□□ -1.56
PCNAP12004 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCNAP12004 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PCNAP12004 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.3□□□□□ -1.56
PCNAP12004 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.3□□□□□ -1.56
PCNAP12004 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.3□□□□□ -1.56
PCNAP12004 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.3□□□□□ -1.56
PCNAP12004 AC027243.2-201ENST00000602530 724 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC068620.3-201ENST00000602749 560 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC079880.2-201ENST00000603790 1213 ntBASIC5.3□□□□□ -1.56
PCNAP12004 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 AC005156.1-201ENST00000613371 573 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC022960.3-201ENST00000619794 441 ntBASIC5.3□□□□□ -1.56
PCNAP12004 RPL23AP61-201ENST00000623642 466 ntBASIC5.3□□□□□ -1.56
PCNAP12004 AC010608.3-201ENST00000625048 527 ntBASIC5.3□□□□□ -1.56
PCNAP12004 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.3□□□□□ -1.56
PCNAP12004 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 Z95331.1-201ENST00000623075 23112 ntBASIC5.3□□□□□ -1.56
PCNAP12004 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCNAP12004 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.3□□□□□ -1.56
PCNAP12004 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCNAP12004 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
PCNAP12004 AL359715.3-201ENST00000569267 2123 ntBASIC5.29□□□□□ -1.56
PCNAP12004 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.29□□□□□ -1.56
PCNAP12004 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCNAP12004 RNA5SP46-201ENST00000362370 120 ntBASIC5.29□□□□□ -1.56
PCNAP12004 RNU6-252P-201ENST00000363232 107 ntBASIC5.29□□□□□ -1.56
PCNAP12004 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PCNAP12004 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.29□□□□□ -1.56
PCNAP12004 AL590806.1-201ENST00000415818 853 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC093155.2-201ENST00000420734 937 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC093084.1-201ENST00000424233 687 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.29□□□□□ -1.56
PCNAP12004 OR6D1P-201ENST00000436165 939 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 AC073109.1-201ENST00000445066 978 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.29□□□□□ -1.56
PCNAP12004 AL096829.2-201ENST00000446582 742 ntBASIC5.29□□□□□ -1.56
PCNAP12004 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.29□□□□□ -1.56
PCNAP12004 AC020779.1-201ENST00000478757 796 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC121161.1-201ENST00000510606 652 ntBASIC5.29□□□□□ -1.56
PCNAP12004 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.29□□□□□ -1.56
PCNAP12004 AC079064.1-201ENST00000528365 362 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC008521.2-201ENST00000591021 259 ntBASIC5.29□□□□□ -1.56
PCNAP12004 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 AC016597.2-201ENST00000613256 341 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC004477.3-201ENST00000614061 590 ntBASIC5.29□□□□□ -1.56
PCNAP12004 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 AC099654.8-201ENST00000637757 681 ntBASIC5.29□□□□□ -1.56
PCNAP12004 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.29□□□□□ -1.56
PCNAP12004 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.29□□□□□ -1.56
PCNAP12004 OR13C1P-202ENST00000641378 2919 ntBASIC5.29□□□□□ -1.56
PCNAP12004 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 KARSP1-201ENST00000451871 1752 ntBASIC5.29□□□□□ -1.56
PCNAP12004 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCNAP12004 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.28□□□□□ -1.56
PCNAP12004 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PCNAP12004 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms