Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPL21P126-201ENST00000470049 478 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 IGHVIII-47-1-201ENST00000518187 331 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.26□□□□□ -1.09
TOP2AP11388 TRAV8-5-201ENST00000537369 341 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.26□□□□□ -1.09
TOP2AP11388 AP000843.1-201ENST00000624880 701 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 UGT2B26P-201ENST00000508672 1613 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TOP2AP11388 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TOP2AP11388 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.25□□□□□ -1.09
TOP2AP11388 FTH1P16-201ENST00000435241 552 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 RPL7P19-201ENST00000469948 618 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 AC104763.1-201ENST00000475274 360 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 IGLVIV-65-201ENST00000517313 360 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 AP000619.2-201ENST00000546014 969 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 VN1R85P-201ENST00000601587 426 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 AC073137.1-201ENST00000605636 634 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 VN2R3P-201ENST00000422626 1412 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 DHX9P1-201ENST00000436565 3076 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
TOP2AP11388 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC8.25□□□□□ -1.09
TOP2AP11388 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.25□□□□□ -1.09
TOP2AP11388 ABCC13-202ENST00000463099 3842 ntBASIC8.25□□□□□ -1.09
TOP2AP11388 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
TOP2AP11388 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
TOP2AP11388 OR1F12-201ENST00000402365 945 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 H2AFZP5-201ENST00000446960 382 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 MRPL35P2-201ENST00000448009 511 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 CYCSP34-201ENST00000458172 304 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AC007537.2-201ENST00000472093 511 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 NIFKP7-201ENST00000503365 834 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AC100784.1-201ENST00000522790 310 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC8.24□□□□□ -1.09
TOP2AP11388 AL049830.4-201ENST00000555149 351 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
TOP2AP11388 AL133243.1-201ENST00000614487 366 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC8.24□□□□□ -1.09
TOP2AP11388 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC8.24□□□□□ -1.09
TOP2AP11388 AL592182.3-201ENST00000642132 3304 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC8.24□□□□□ -1.09
TOP2AP11388 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC8.24□□□□□ -1.09
TOP2AP11388 AC092162.1-201ENST00000432828 434 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AL451139.1-201ENST00000434718 346 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 ACTR3P2-201ENST00000439585 1257 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 SCARNA10-201ENST00000459255 330 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.24□□□□□ -1.09
TOP2AP11388 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
TOP2AP11388 MIR1254-2-201ENST00000579553 63 ntBASIC8.24□□□□□ -1.09
TOP2AP11388 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
TOP2AP11388 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC8.23□□□□□ -1.09
TOP2AP11388 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOP2AP11388 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC8.23□□□□□ -1.09
TOP2AP11388 AL591135.1-201ENST00000401578 5914 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
TOP2AP11388 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.23□□□□□ -1.09
TOP2AP11388 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.23□□□□□ -1.09
TOP2AP11388 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOP2AP11388 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.23□□□□□ -1.09
TOP2AP11388 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
TOP2AP11388 RPL21P67-201ENST00000402896 478 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 SNX10-203ENST00000409367 746 ntTSL 5 BASIC8.23□□□□□ -1.09
TOP2AP11388 RN7SKP27-201ENST00000410684 333 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 NDUFA5P1-201ENST00000433858 341 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 AC239367.2-201ENST00000447309 705 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC8.23□□□□□ -1.09
TOP2AP11388 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
TOP2AP11388 AP001160.4-201ENST00000596971 382 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.23□□□□□ -1.09
TOP2AP11388 AL445567.2-201ENST00000618935 498 ntBASIC8.23□□□□□ -1.09
TOP2AP11388 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC8.23□□□□□ -1.09
TOP2AP11388 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TOP2AP11388 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
TOP2AP11388 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC8.22□□□□□ -1.09
TOP2AP11388 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TOP2AP11388 TMSB10P2-201ENST00000416049 131 ntBASIC8.22□□□□□ -1.09
TOP2AP11388 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC8.22□□□□□ -1.09
TOP2AP11388 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.22□□□□□ -1.09
TOP2AP11388 AC122718.1-201ENST00000439448 744 ntBASIC8.22□□□□□ -1.09
TOP2AP11388 FAM133DP-201ENST00000464802 691 ntBASIC8.22□□□□□ -1.09
TOP2AP11388 RPL23AP53-201ENST00000521854 457 ntBASIC8.22□□□□□ -1.09
TOP2AP11388 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC8.22□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms