Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC134349.2-201ENST00000535136 910 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 RN7SL52P-201ENST00000584271 284 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AL139407.1-201ENST00000613826 1175 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC004808.2-201ENST00000627965 773 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 PABPC1P6-201ENST00000445594 1829 ntBASIC4.43□□□□□ -1.7
HLA-DPB1P04440 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DPB1P04440 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 MIR223-201ENST00000385204 110 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 LRRC37BP1-201ENST00000398851 714 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL589994.1-201ENST00000404962 340 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL121578.1-201ENST00000428051 892 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL691482.1-201ENST00000453255 87 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 RN7SL799P-201ENST00000475891 298 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC022616.2-201ENST00000523185 300 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC024940.3-201ENST00000538551 316 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC087783.2-201ENST00000605070 562 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AP005432.2-201ENST00000608162 586 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 OR7M1P-201ENST00000608946 533 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC090527.3-201ENST00000619041 548 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL596275.2-204ENST00000641628 552 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AL596275.2-206ENST00000641957 626 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 UGT2B26P-201ENST00000508672 1613 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.42□□□□□ -1.7
HLA-DPB1P04440 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
HLA-DPB1P04440 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 IL6STP1-201ENST00000346911 1020 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 FABP7P1-201ENST00000424004 391 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 RPS4XP16-201ENST00000427198 791 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 RPS27P18-201ENST00000431701 247 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC073052.1-201ENST00000440417 714 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 Z80107.2-201ENST00000445127 392 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 RPS17P2-201ENST00000461663 408 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC079841.1-201ENST00000481228 950 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 RNA5SP92-201ENST00000516437 110 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 Y_RNA.719-201ENST00000517156 106 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 RPL21P7-201ENST00000557463 483 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC010547.7-201ENST00000570323 333 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC115989.2-201ENST00000578640 563 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 SUMO2P15-201ENST00000604285 278 ntBASIC4.41□□□□□ -1.7
HLA-DPB1P04440 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DPB1P04440 OR8G7P-201ENST00000616658 848 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 987.8 ms