Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
APOBP04114 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 RNU6-525P-201ENST00000363685 104 ntBASIC2.9□□□□□ -1.95
APOBP04114 SNORA62.3-201ENST00000365110 153 ntBASIC2.9□□□□□ -1.95
APOBP04114 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 HMGB3P5-201ENST00000428894 612 ntBASIC2.9□□□□□ -1.95
APOBP04114 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.9□□□□□ -1.95
APOBP04114 AL356276.2-201ENST00000435919 558 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 CARD16-203ENST00000525374 503 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 MIR3653-201ENST00000625572 110 ntBASIC2.9□□□□□ -1.95
APOBP04114 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 AL592182.3-201ENST00000642132 3304 ntBASIC2.9□□□□□ -1.95
APOBP04114 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
APOBP04114 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.9□□□□□ -1.95
APOBP04114 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC2.9□□□□□ -1.95
APOBP04114 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 RNA5SP283-201ENST00000365604 119 ntBASIC2.9□□□□□ -1.95
APOBP04114 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.9□□□□□ -1.95
APOBP04114 U3.35-201ENST00000408405 208 ntBASIC2.9□□□□□ -1.95
APOBP04114 ARL4AP4-201ENST00000434170 518 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC2.9□□□□□ -1.95
APOBP04114 OR8Q1P-201ENST00000526467 655 ntBASIC2.9□□□□□ -1.95
APOBP04114 OR4A6P-201ENST00000534364 970 ntBASIC2.9□□□□□ -1.95
APOBP04114 MIR3124-201ENST00000582636 67 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC018695.5-201ENST00000605872 315 ntBASIC2.9□□□□□ -1.95
APOBP04114 AC019206.1-201ENST00000621938 425 ntBASIC2.9□□□□□ -1.95
APOBP04114 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
APOBP04114 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 AL672167.2-201ENST00000377164 879 ntBASIC2.89□□□□□ -1.95
APOBP04114 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
APOBP04114 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AK4P6-201ENST00000505168 528 ntBASIC2.89□□□□□ -1.95
APOBP04114 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AP000827.1-201ENST00000527814 258 ntBASIC2.89□□□□□ -1.95
APOBP04114 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 MIR8059-201ENST00000620427 81 ntBASIC2.89□□□□□ -1.95
APOBP04114 AC012442.3-202ENST00000636742 206 ntBASIC2.89□□□□□ -1.95
APOBP04114 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
APOBP04114 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 RPS26P8-201ENST00000393490 348 ntBASIC2.89□□□□□ -1.95
APOBP04114 OR1F12-201ENST00000402365 945 ntBASIC2.89□□□□□ -1.95
APOBP04114 RPL37P1-201ENST00000432310 284 ntBASIC2.89□□□□□ -1.95
APOBP04114 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.89□□□□□ -1.95
APOBP04114 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.89□□□□□ -1.95
APOBP04114 AC005412.2-201ENST00000492004 341 ntBASIC2.89□□□□□ -1.95
APOBP04114 AC010460.1-201ENST00000507087 466 ntBASIC2.89□□□□□ -1.95
APOBP04114 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC2.89□□□□□ -1.95
APOBP04114 FKBP1BP1-201ENST00000553366 325 ntBASIC2.89□□□□□ -1.95
APOBP04114 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.89□□□□□ -1.95
APOBP04114 AC087499.8-201ENST00000578406 226 ntBASIC2.89□□□□□ -1.95
APOBP04114 VN1R92P-201ENST00000598511 928 ntBASIC2.89□□□□□ -1.95
APOBP04114 IGKV2OR2-2-201ENST00000605025 300 ntBASIC2.89□□□□□ -1.95
APOBP04114 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
APOBP04114 FTX-215ENST00000638681 9771 ntTSL 5 BASIC2.89□□□□□ -1.95
APOBP04114 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
APOBP04114 AC233289.1-201ENST00000403700 508 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms