Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 KATNBL1P4-201ENST00000503545 918 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.71□□□□□ -1.5
COL2A1P02458 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.71□□□□□ -1.5
COL2A1P02458 AGGF1P9-201ENST00000561884 913 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 MIR92B-201ENST00000607575 96 ntBASIC5.71□□□□□ -1.5
COL2A1P02458 ASNSP1-204ENST00000641977 1664 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL2A1P02458 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 KARSP3-201ENST00000571212 1504 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 AC093297.3-201ENST00000607056 2517 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 TLK1P1-201ENST00000456760 2440 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 AC022417.1-201ENST00000624768 1303 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL2A1P02458 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 SNORA48.7-201ENST00000391302 135 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 RPL17P50-201ENST00000396131 546 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 ATG4AP1-201ENST00000416893 538 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.7□□□□□ -1.5
COL2A1P02458 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.7□□□□□ -1.5
COL2A1P02458 CEACAMP6-201ENST00000452007 574 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 snoU13.1-201ENST00000459157 104 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 PPIAP21-201ENST00000464473 501 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.7□□□□□ -1.5
COL2A1P02458 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.7□□□□□ -1.5
COL2A1P02458 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
COL2A1P02458 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.7□□□□□ -1.5
COL2A1P02458 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
COL2A1P02458 AP005119.2-201ENST00000579735 1105 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 AL121932.1-201ENST00000605542 214 ntBASIC5.7□□□□□ -1.5
COL2A1P02458 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.7□□□□□ -1.5
COL2A1P02458 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
COL2A1P02458 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.69□□□□□ -1.5
COL2A1P02458 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 OR56B2P-202ENST00000641377 2453 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL2A1P02458 AC002525.1-201ENST00000624392 1622 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL2A1P02458 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL2A1P02458 MIR23B-201ENST00000384832 97 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 SNORA11C-201ENST00000408532 129 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 QRSL1P2-201ENST00000418582 964 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.69□□□□□ -1.5
COL2A1P02458 RPL23AP1-201ENST00000428990 471 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AC044797.1-201ENST00000445744 679 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.69□□□□□ -1.5
COL2A1P02458 RN7SL558P-201ENST00000497468 299 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 AC133555.2-201ENST00000550213 292 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL2A1P02458 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.69□□□□□ -1.5
COL2A1P02458 AC125494.2-201ENST00000602431 657 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AL137246.1-201ENST00000607072 977 ntBASIC5.69□□□□□ -1.5
COL2A1P02458 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
COL2A1P02458 AC009643.2-201ENST00000603543 1448 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL2A1P02458 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.68□□□□□ -1.5
COL2A1P02458 AC011447.7-201ENST00000624228 1590 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
COL2A1P02458 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
COL2A1P02458 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
COL2A1P02458 RPL21P67-201ENST00000402896 478 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 PCNPP4-201ENST00000414817 517 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.68□□□□□ -1.5
COL2A1P02458 AL389915.1-201ENST00000422463 466 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.68□□□□□ -1.5
COL2A1P02458 TXNP2-201ENST00000443918 295 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.68□□□□□ -1.5
COL2A1P02458 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.68□□□□□ -1.5
COL2A1P02458 AC083829.1-201ENST00000503756 657 ntBASIC5.68□□□□□ -1.5
COL2A1P02458 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms