Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 CCAT2-201ENST00000630920 1752 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 AC120338.1-201ENST00000625074 1541 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 AC100871.1-201ENST00000507871 1456 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TIMP1P01033 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.34□□□□□ -1.55
TIMP1P01033 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.34□□□□□ -1.55
TIMP1P01033 COX6CP13-201ENST00000428703 226 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.34□□□□□ -1.55
TIMP1P01033 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.34□□□□□ -1.55
TIMP1P01033 AL162591.2-201ENST00000449634 317 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.34□□□□□ -1.55
TIMP1P01033 snoU13.29-201ENST00000459370 104 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 AC011276.1-201ENST00000469688 323 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 RPL7AP10-201ENST00000481016 791 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 RNU2-30P-201ENST00000516209 141 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.34□□□□□ -1.55
TIMP1P01033 AC068831.4-201ENST00000556118 109 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 MIR7853-201ENST00000584820 132 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.34□□□□□ -1.55
TIMP1P01033 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.34□□□□□ -1.55
TIMP1P01033 BNIP3P22-201ENST00000593399 556 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 AC009951.1-201ENST00000623674 2614 ntBASIC5.34□□□□□ -1.55
TIMP1P01033 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TIMP1P01033 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TIMP1P01033 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
TIMP1P01033 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TIMP1P01033 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TIMP1P01033 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TIMP1P01033 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TIMP1P01033 TBCAP2-201ENST00000416175 326 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 ATG4AP1-201ENST00000416893 538 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 CYCSP11-201ENST00000436426 315 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 MED28P3-201ENST00000444288 531 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 AC104971.1-201ENST00000495117 578 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 NPM1P6-201ENST00000521088 871 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.33□□□□□ -1.56
TIMP1P01033 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.33□□□□□ -1.56
TIMP1P01033 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.33□□□□□ -1.56
TIMP1P01033 MIR3939-201ENST00000582614 106 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 AC010424.2-201ENST00000607594 443 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 AL161637.1-201ENST00000622380 412 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TIMP1P01033 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TIMP1P01033 IQCB2P-201ENST00000401788 1633 ntBASIC5.33□□□□□ -1.56
TIMP1P01033 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.33□□□□□ -1.56
TIMP1P01033 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.32□□□□□ -1.56
TIMP1P01033 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 AP000756.2-201ENST00000624168 2567 ntBASIC5.32□□□□□ -1.56
TIMP1P01033 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.32□□□□□ -1.56
TIMP1P01033 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TIMP1P01033 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 HMGB1P23-201ENST00000518743 568 ntBASIC5.32□□□□□ -1.56
TIMP1P01033 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.32□□□□□ -1.56
TIMP1P01033 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.32□□□□□ -1.56
TIMP1P01033 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.32□□□□□ -1.56
TIMP1P01033 AP000619.2-201ENST00000546014 969 ntBASIC5.32□□□□□ -1.56
TIMP1P01033 AC133555.2-201ENST00000550213 292 ntBASIC5.32□□□□□ -1.56
TIMP1P01033 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.32□□□□□ -1.56
TIMP1P01033 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC5.32□□□□□ -1.56
TIMP1P01033 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.32□□□□□ -1.56
TIMP1P01033 AL049794.2-201ENST00000616301 365 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms