Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 EIF2S2P5-201ENST00000457635 968 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC007998.1-201ENST00000474156 672 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 PSMA2P2-201ENST00000504319 686 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 NANOGNBP2-201ENST00000544753 553 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 GLRXP2-201ENST00000555594 321 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 SLC25A36P1-201ENST00000590111 465 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC005520.3-201ENST00000602874 370 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC104695.2-201ENST00000605056 775 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AL008729.2-201ENST00000606393 473 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 AC091979.2-201ENST00000607514 214 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC079298.2-201ENST00000623885 459 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 LINC01109-201ENST00000603837 3081 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.87□□□□□ -1.79
SSSCA1O60232 AC011493.1-201ENST00000596753 1632 ntBASIC3.87□□□□□ -1.79
SSSCA1O60232 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SSSCA1O60232 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SSSCA1O60232 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
SSSCA1O60232 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSSCA1O60232 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 CYP4Z2P-201ENST00000423332 1512 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.86□□□□□ -1.79
SSSCA1O60232 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SSSCA1O60232 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AC009804.1-201ENST00000400949 179 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC233289.1-201ENST00000403700 508 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 RPS17P8-201ENST00000434525 335 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC093414.1-201ENST00000434712 514 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 TMX2P1-201ENST00000436507 708 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 HMGN1P36-201ENST00000446623 298 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AL591363.1-201ENST00000450091 483 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 ATP5G1P3-201ENST00000463301 410 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC090142.2-201ENST00000483263 416 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC012158.1-204ENST00000483430 465 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC108022.1-201ENST00000493466 478 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 TOMM20P1-201ENST00000534518 427 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AP002373.2-201ENST00000541631 1060 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 FKBP1BP1-201ENST00000553366 325 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AC007066.2-202ENST00000566531 914 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC015912.2-201ENST00000571053 181 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AC087283.1-201ENST00000604029 1074 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.86□□□□□ -1.79
SSSCA1O60232 AL022401.1-201ENST00000619498 108 ntBASIC3.86□□□□□ -1.79
SSSCA1O60232 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.86□□□□□ -1.79
SSSCA1O60232 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSSCA1O60232 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.86□□□□□ -1.79
SSSCA1O60232 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SSSCA1O60232 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC091046.3-201ENST00000631455 1574 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 CASC19-204ENST00000641001 2055 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.85□□□□□ -1.79
SSSCA1O60232 SNORA17.1-201ENST00000362945 126 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 RNA5SP28-201ENST00000363841 119 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AL391422.1-201ENST00000402155 436 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SSSCA1O60232 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 GTF2IP2-201ENST00000424290 697 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 AC005033.1-201ENST00000428904 813 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC3.85□□□□□ -1.79
SSSCA1O60232 RPL7AP28-201ENST00000464513 571 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SSSCA1O60232 RPL23AP65-201ENST00000475608 468 ntBASIC3.85□□□□□ -1.79
SSSCA1O60232 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms