Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
PHGDHO43175 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC004158.1-201ENST00000564508 4319 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC068870.1-201ENST00000563737 2455 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC104966.1-201ENST00000467010 1464 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC100871.1-201ENST00000507871 1456 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 RNU6-636P-201ENST00000384598 107 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 MIR525-201ENST00000384978 85 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 AL136310.1-201ENST00000404926 654 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 RPL22P18-201ENST00000417197 377 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 C1DP1-201ENST00000426049 402 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 HIGD1AP12-201ENST00000427832 281 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 MTND2P40-201ENST00000436718 841 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 TUBB4BP6-201ENST00000437576 479 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC073052.1-201ENST00000440417 714 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 EEF1A1P39-201ENST00000440791 250 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 EIF5AP4-201ENST00000441206 465 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AL035551.1-201ENST00000446931 348 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 CFL1P4-201ENST00000451536 498 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC009963.3-201ENST00000458090 486 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC091860.1-201ENST00000505723 432 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 GLUD1P3-202ENST00000508551 200 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC018442.3-201ENST00000523025 183 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AP003396.4-201ENST00000527574 265 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.67□□□□□ -1.5
PHGDHO43175 AP002812.4-201ENST00000532139 286 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 PCNAP4-201ENST00000532690 730 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.67□□□□□ -1.5
PHGDHO43175 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.67□□□□□ -1.5
PHGDHO43175 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 AC096996.1-201ENST00000563813 325 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.67□□□□□ -1.5
PHGDHO43175 AC090236.2-201ENST00000587933 1101 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC002069.2-201ENST00000603580 883 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 RPL12P48-201ENST00000605620 304 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 NANOGP3-201ENST00000605855 286 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 MIR6889-201ENST00000613185 59 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC013470.4-201ENST00000619978 986 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 AC005618.4-201ENST00000625053 554 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 FRG1EP-201ENST00000634469 770 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 AP000473.2-201ENST00000602659 1537 ntBASIC5.67□□□□□ -1.5
PHGDHO43175 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PHGDHO43175 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PHGDHO43175 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PHGDHO43175 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PHGDHO43175 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 IGKV7-3-201ENST00000357453 298 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 RNA5SP500-201ENST00000364486 119 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 RNU4-28P-201ENST00000364739 141 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 SNORA5.1-201ENST00000384275 131 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 KRR1P1-201ENST00000419430 803 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 BX284632.2-201ENST00000421091 399 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AL513175.2-201ENST00000422071 443 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 OR10T1P-201ENST00000424327 947 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.66□□□□□ -1.5
PHGDHO43175 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 CDY14P-201ENST00000431260 1014 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.66□□□□□ -1.5
PHGDHO43175 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PHGDHO43175 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 MTCYBP31-201ENST00000438855 1122 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 CDY12P-201ENST00000440679 1015 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 AL512605.1-202ENST00000441919 381 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.66□□□□□ -1.5
PHGDHO43175 AL359955.2-201ENST00000445380 353 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 CDY13P-201ENST00000445813 1015 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 TIMM8BP2-201ENST00000445940 251 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 CDY23P-201ENST00000451661 1014 ntBASIC5.66□□□□□ -1.5
PHGDHO43175 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.66□□□□□ -1.5
PHGDHO43175 PPIAP27-201ENST00000453800 265 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms