Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRIM38O00635 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM38O00635 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM38O00635 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM38O00635 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
TRIM38O00635 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM38O00635 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 RN7SKP185-201ENST00000362813 326 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 RN7SKP124-201ENST00000364730 341 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM38O00635 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM38O00635 RNU6-1005P-201ENST00000384519 107 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 RNU6-244P-201ENST00000391028 104 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 RPL11P3-201ENST00000395256 523 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AP000357.1-201ENST00000409926 1165 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 RN7SKP222-201ENST00000410651 315 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 HYALP1-201ENST00000417674 1279 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC022022.1-201ENST00000430304 178 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 FTLP19-201ENST00000433300 394 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC012075.1-201ENST00000436549 580 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 RPS12P17-201ENST00000438591 377 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 MED28P3-201ENST00000444288 531 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 ART2BP-201ENST00000453501 499 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 AL133445.1-201ENST00000467051 452 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC096741.1-201ENST00000472250 846 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC022215.1-201ENST00000481770 362 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 BOLA3P3-201ENST00000505182 232 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 AP003717.3-201ENST00000544832 1180 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC008083.2-201ENST00000546707 476 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC084824.2-201ENST00000548906 345 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 OR11H3P-201ENST00000554547 982 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AL049872.1-201ENST00000556323 322 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM38O00635 GARSP1-201ENST00000570895 719 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC112220.2-201ENST00000605513 533 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC064807.4-201ENST00000607201 407 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 OR2BH1P-201ENST00000608850 864 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 AC008115.3-201ENST00000614874 549 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 Z99129.2-201ENST00000619967 314 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 AC007342.8-201ENST00000623278 678 ntBASIC5.71□□□□□ -1.5
TRIM38O00635 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.71□□□□□ -1.5
TRIM38O00635 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM38O00635 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM38O00635 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
TRIM38O00635 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM38O00635 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM38O00635 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 SNORA5.1-201ENST00000384275 131 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 RNU6-452P-201ENST00000384406 107 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 MIR105-2-201ENST00000385083 81 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM38O00635 RN7SKP279-201ENST00000411383 298 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 RPS3AP25-201ENST00000411660 793 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 VN1R51P-201ENST00000411675 945 ntBASIC5.7□□□□□ -1.5
TRIM38O00635 AC105402.1-201ENST00000413336 545 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms