Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 MIR3936-201ENST00000584304 110 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC084373.1-201ENST00000603311 235 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AL589674.2-201ENST00000604304 337 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 AL731532.2-201ENST00000623542 1953 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SLC28A1O00337 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.92□□□□□ -1.62
SLC28A1O00337 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SLC28A1O00337 AC000374.1-201ENST00000434698 1745 ntBASIC4.92□□□□□ -1.62
SLC28A1O00337 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC28A1O00337 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC28A1O00337 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 GSTA12P-201ENST00000402398 508 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AL589655.1-201ENST00000405398 482 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 RNA5SP178-201ENST00000410380 128 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC28A1O00337 OR5M12P-201ENST00000423388 929 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 EI24P4-201ENST00000423683 1078 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 NANOGP4-201ENST00000427230 913 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC28A1O00337 TRIM60P13-201ENST00000432350 1283 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 PA2G4P6-201ENST00000438325 1197 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 BTF3P6-201ENST00000448054 499 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 CALM1P2-201ENST00000452941 448 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC037198.2-201ENST00000478845 733 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 BTG4P1-201ENST00000510421 183 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC28A1O00337 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 RNU6-760P-201ENST00000516078 97 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 RNU6-362P-201ENST00000516736 90 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 RPL23AP53-201ENST00000521854 457 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC28A1O00337 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC28A1O00337 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC28A1O00337 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC28A1O00337 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.91□□□□□ -1.62
SLC28A1O00337 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.91□□□□□ -1.62
SLC28A1O00337 AC005021.1-201ENST00000608730 355 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AL139407.1-201ENST00000613826 1175 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC007204.2-201ENST00000615022 616 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 LINC00216-201ENST00000623548 1126 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 AC021106.3-201ENST00000623925 531 ntBASIC4.91□□□□□ -1.62
SLC28A1O00337 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SLC28A1O00337 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SLC28A1O00337 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC28A1O00337 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
SLC28A1O00337 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SLC28A1O00337 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC28A1O00337 AC007342.7-201ENST00000624610 2337 ntBASIC4.9□□□□□ -1.62
SLC28A1O00337 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SLC28A1O00337 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC002524.1-201ENST00000411687 547 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AL606490.7-201ENST00000433136 191 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 MRPS33P4-201ENST00000434892 317 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AL138899.2-201ENST00000439139 499 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SLC28A1O00337 RPS26P41-201ENST00000450370 284 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AL356981.1-201ENST00000454879 684 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AP002345.1-201ENST00000456493 928 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 TPT1P1-201ENST00000458495 518 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 GYG1P1-201ENST00000460864 698 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 SIAH1P1-201ENST00000479411 923 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.9□□□□□ -1.63
SLC28A1O00337 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.9□□□□□ -1.63
SLC28A1O00337 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 HMGB1P47-201ENST00000511281 589 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 RPS27AP18-201ENST00000515536 459 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 IGHV3-63-201ENST00000518422 341 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.9□□□□□ -1.63
SLC28A1O00337 OR8X1P-201ENST00000534542 869 ntBASIC4.9□□□□□ -1.63
SLC28A1O00337 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms