Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC023490.2-201ENST00000359859 470 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 RNA5SP234-201ENST00000363916 119 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 RPL23AP4-201ENST00000427757 463 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AL353898.1-201ENST00000444055 238 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 MTND2P3-201ENST00000452458 470 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC188H7C350 AL390726.5-202ENST00000564800 256 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 RPL10P14-201ENST00000565265 298 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 MIR1273E-201ENST00000581165 102 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 AC006840.1-201ENST00000623069 542 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 UGT2B26P-201ENST00000508672 1613 ntBASIC5.29□□□□□ -1.56
CCDC188H7C350 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 OR55B1P-203ENST00000641518 2602 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC188H7C350 RN7SKP15-201ENST00000364742 309 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 OR7E156P-201ENST00000400303 464 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 NUDT19P3-201ENST00000404698 555 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 RPL26P37-201ENST00000411983 438 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 SLC20A1P1-201ENST00000413906 956 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC006455.6-201ENST00000426192 893 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 RPS4XP16-201ENST00000427198 791 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AC079807.1-201ENST00000429993 481 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 HSPE1P22-201ENST00000456856 327 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 RN7SL443P-201ENST00000464331 290 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 RPL7P6-201ENST00000480903 738 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 RN7SL346P-201ENST00000491561 294 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 MIR4505-201ENST00000582238 73 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AP004372.1-201ENST00000604842 844 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 AC005021.1-201ENST00000608730 355 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AC097505.1-201ENST00000610199 565 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AC003001.2-201ENST00000616294 831 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AC079298.2-201ENST00000623885 459 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AP003499.2-201ENST00000624100 483 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC188H7C350 HPVC1-201ENST00000629899 1198 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 MIR1910-201ENST00000636955 80 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 AL163152.1-201ENST00000642001 374 ntBASIC5.28□□□□□ -1.56
CCDC188H7C350 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC188H7C350 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC188H7C350 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC188H7C350 NXF4-202ENST00000416098 1465 ntBASIC5.27□□□□□ -1.57
CCDC188H7C350 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC188H7C350 AC107068.1-201ENST00000563286 4218 ntBASIC5.27□□□□□ -1.57
CCDC188H7C350 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC188H7C350 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC188H7C350 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC188H7C350 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC188H7C350 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC188H7C350 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC188H7C350 AL590806.1-201ENST00000415818 853 ntBASIC5.27□□□□□ -1.57
CCDC188H7C350 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms