Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 MIR6886-201ENST00000619864 61 ntBASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM49D1C9J1S8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM49D1C9J1S8 AC083843.3-201ENST00000623679 2186 ntBASIC4.84□□□□□ -1.64
TRIM49D1C9J1S8 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM49D1C9J1S8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC108751.5-201ENST00000492880 1336 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 SNORA51.1-201ENST00000363243 140 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AL080315.1-201ENST00000406055 466 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 RN7SKP199-201ENST00000410325 305 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 VN1R37P-201ENST00000419096 748 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC011225.1-201ENST00000457751 369 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC090589.1-201ENST00000473109 362 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 RN7SL244P-201ENST00000493405 297 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AL136038.1-201ENST00000497246 351 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 SUMO2P4-201ENST00000504193 276 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC024558.1-201ENST00000505008 528 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 RNU6-964P-201ENST00000516524 69 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 DPRXP4-201ENST00000578053 568 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AC126915.2-201ENST00000610957 190 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AL627230.1-201ENST00000613077 211 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 AL591926.8-201ENST00000616876 211 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM49D1C9J1S8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 ARL4AP5-201ENST00000404372 599 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 RHOT1P3-201ENST00000436571 331 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 NDUFA5P8-201ENST00000449019 346 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC116562.1-201ENST00000485355 781 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 UBA52P7-201ENST00000486088 380 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 RNA5SP392-201ENST00000516905 112 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC093249.4-201ENST00000564755 259 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 COX6CP4-201ENST00000605798 228 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 MIR6768-201ENST00000610734 72 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC005086.4-201ENST00000623065 213 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC009950.2-201ENST00000636548 183 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC073869.7-201ENST00000640874 297 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 AC092435.4-201ENST00000623012 4159 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 MTCO1P11-201ENST00000429111 1528 ntBASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.82□□□□□ -1.64
TRIM49D1C9J1S8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 CDY11P-201ENST00000447168 1651 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 AC021242.1-201ENST00000507315 2035 ntBASIC4.81□□□□□ -1.64
TRIM49D1C9J1S8 SNURFL-201ENST00000309296 343 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms