Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AL133351.3-201ENST00000454998 193 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC099670.1-201ENST00000455141 783 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RN7SL39P-201ENST00000462264 297 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC124945.1-201ENST00000485133 188 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RNA5SP206-201ENST00000516703 121 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AP005136.1-201ENST00000579765 429 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AP000255.1-201ENST00000610276 676 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 FRG1HP-204ENST00000617940 757 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC067852.7-201ENST00000623270 535 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 AC103706.2-201ENST00000638080 240 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 LINC01808-202ENST00000641680 1116 ntBASIC6.4□□□□□ -1.38
CCDC66A2RUB6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CCDC66A2RUB6 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 PROS2P-201ENST00000474651 1951 ntBASIC6.4□□□□□ -1.39
CCDC66A2RUB6 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 AC083899.1-201ENST00000454465 3819 ntBASIC6.4□□□□□ -1.39
CCDC66A2RUB6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 AC053481.2-202ENST00000582394 1500 ntBASIC6.4□□□□□ -1.39
CCDC66A2RUB6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC66A2RUB6 AL137141.1-201ENST00000624622 4836 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 FAM133CP-201ENST00000332869 704 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RN7SKP185-201ENST00000362813 326 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RNU4-31P-201ENST00000384211 141 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 MIR188-201ENST00000385034 86 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AL157702.1-201ENST00000398764 426 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 QRSL1P2-201ENST00000418582 964 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 SEPT2P1-201ENST00000419651 180 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 OSTCP4-201ENST00000424397 449 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC005345.1-201ENST00000431868 217 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 CXCR2P1-202ENST00000443392 1074 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AL035407.2-201ENST00000454090 378 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RAP1BP2-201ENST00000478270 544 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RN7SL741P-201ENST00000482473 289 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 RN7SL649P-201ENST00000496974 275 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 MIR3157-201ENST00000578688 85 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 MIR6780B-201ENST00000610307 79 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AL162574.1-201ENST00000615702 950 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC109454.4-201ENST00000623411 649 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC011815.3-201ENST00000624194 473 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC007671.2-201ENST00000637344 619 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 AC111188.2-201ENST00000529697 1387 ntBASIC6.39□□□□□ -1.39
CCDC66A2RUB6 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC66A2RUB6 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms