Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP81-201ENST00000365603 331 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 MIR323B-201ENST00000385269 82 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 SNORA11C-201ENST00000408532 129 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RN7SKP29-201ENST00000410957 272 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC002524.1-201ENST00000411687 547 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 NANOGP5-201ENST00000424456 877 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AP001324.1-201ENST00000428553 399 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC073069.1-201ENST00000428657 441 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL035246.1-201ENST00000433554 1255 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 GTF2IP3-201ENST00000433887 494 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL929288.2-201ENST00000446368 407 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 HMGN1P36-201ENST00000446623 298 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 PPIAP20-201ENST00000449839 135 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL606490.1-201ENST00000452266 765 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 DNAJC19P8-201ENST00000452887 259 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RNU7-140P-201ENST00000459546 60 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL157777.1-201ENST00000468100 304 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RN7SL273P-201ENST00000481561 299 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 RPS12P31-201ENST00000491419 398 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL035404.1-201ENST00000497982 568 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 NENFP3-201ENST00000503735 313 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC093752.1-206ENST00000511823 336 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 IGKV2-36-201ENST00000519999 223 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 OR8G5-201ENST00000524943 1041 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 OR10V3P-201ENST00000525712 725 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 HNRNPCP1-201ENST00000556181 766 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC090751.1-201ENST00000566966 267 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC024060.1-201ENST00000607052 494 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL352984.2-202ENST00000613699 155 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC126175.1-201ENST00000617041 758 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC090506.2-201ENST00000624521 419 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC092608.3-201ENST00000625017 386 ntBASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.48□□□□□ -1.37
COL4A3BPQ9Y5P4 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RNU6-353P-201ENST00000364266 108 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 MCTS2P-201ENST00000394552 546 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RNA5SP178-201ENST00000410380 128 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RPS7P9-201ENST00000414704 586 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC092634.2-201ENST00000428146 1010 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 USP9YP24-201ENST00000434374 697 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 USP9YP17-201ENST00000444617 696 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RPL36AP39-201ENST00000445859 318 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RPL10P17-201ENST00000453852 316 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 OR2AF1P-201ENST00000454899 889 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC006539.1-201ENST00000481419 501 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 RN7SL101P-201ENST00000496350 279 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 ST13P12-201ENST00000508958 1094 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 IGLV3-30-201ENST00000524362 298 ntBASIC6.47□□□□□ -1.37
COL4A3BPQ9Y5P4 AC084824.2-201ENST00000548906 345 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms