Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 SCARNA21.2-201ENST00000516600 166 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AP001269.3-201ENST00000588718 329 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AL591167.1-201ENST00000607321 456 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AL008723.3-201ENST00000608926 449 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC108673.3-201ENST00000609183 335 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 MIR6768-201ENST00000610734 72 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 TUSC7.1-201ENST00000610969 165 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC023509.5-201ENST00000617434 807 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 MIR6886-201ENST00000619864 61 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC005005.4-201ENST00000623789 16698 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC005261.4-201ENST00000600047 1385 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC007842.1-201ENST00000597336 2039 ntBASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHGA3Q9Y5H0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC000367.1-201ENST00000452711 1766 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL359976.1-201ENST00000418655 3528 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 MAPK10-338ENST00000641647 3362 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RNU5A-2P-201ENST00000384337 116 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL096800.1-201ENST00000405326 893 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RNA5SP156-201ENST00000410250 110 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RNA5SP178-201ENST00000410380 128 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 FAM96AP1-201ENST00000430879 482 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 DEFA9P-201ENST00000433042 285 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC234064.1-201ENST00000436312 247 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC005077.1-201ENST00000449226 375 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 BX248409.1-201ENST00000455497 255 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RN7SL273P-201ENST00000481561 299 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RN7SL214P-201ENST00000487317 265 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 Y_RNA.667-201ENST00000516212 107 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 RNU5A-4P-201ENST00000516588 111 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AC010306.1-201ENST00000523223 1117 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 HMGB1P42-201ENST00000532126 553 ntBASIC5.9□□□□□ -1.46
PCDHGA3Q9Y5H0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms