Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MRPS21P2-201ENST00000424704 264 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC097523.2-201ENST00000435551 652 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 SNORA84-201ENST00000459229 133 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC010618.1-201ENST00000469924 477 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 CYCSP29-201ENST00000533731 318 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC023575.1-201ENST00000580510 358 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC069366.1-201ENST00000583159 838 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC097063.1-201ENST00000426714 1797 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC007159.1-201ENST00000566529 4706 ntBASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SHANK2Q9UPX8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC005831.1-201ENST00000624384 1697 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 RNA5SP447-201ENST00000363749 119 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 RNA5SP28-201ENST00000363841 119 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 RPL32P23-201ENST00000397237 405 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 RPS21P8-201ENST00000413365 247 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 COX5BP7-201ENST00000414780 274 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC020593.1-201ENST00000507399 299 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 RNU1-6P-201ENST00000516290 144 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AGGF1P9-201ENST00000561884 913 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC007224.1-201ENST00000564410 144 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC093765.1-201ENST00000603758 881 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 TLK1P1-201ENST00000456760 2440 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC020656.2-201ENST00000613291 5309 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 POMP-202ENST00000460403 1428 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC009237.10-201ENST00000414112 510 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC009237.5-201ENST00000414271 501 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC109327.1-201ENST00000471666 403 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC091868.1-201ENST00000508746 304 ntBASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
SHANK2Q9UPX8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 SOCS5P3-201ENST00000425115 1576 ntBASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 GAPDHP49-201ENST00000421421 961 ntBASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AC079168.2-201ENST00000453977 416 ntBASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AC073091.2-201ENST00000603205 907 ntBASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 AC004232.3-201ENST00000622977 525 ntBASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SHANK2Q9UPX8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SHANK2Q9UPX8 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms