Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 Y_RNA.146-201ENST00000363549 102 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 RNU5A-6P-201ENST00000384136 116 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 RPS7P13-201ENST00000413955 498 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC009237.2-201ENST00000421358 284 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC099782.1-201ENST00000425889 474 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 NPM1P18-201ENST00000434232 732 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 MTND4LP10-201ENST00000435146 291 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ARMC4P1-201ENST00000438905 707 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ARL5AP2-201ENST00000444698 533 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 POU5F1P5-201ENST00000445059 658 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 RPL36AP33-201ENST00000450395 310 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 OR52A4P-201ENST00000472867 958 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 RN7SL379P-201ENST00000479912 293 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ACTR3P3-201ENST00000480448 893 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC104090.1-201ENST00000506341 1171 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 OR5M14P-201ENST00000506803 618 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC021220.1-201ENST00000507445 630 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 RNU6-678P-201ENST00000516832 109 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC006512.2-201ENST00000543250 486 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC008055.1-201ENST00000547032 609 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC125612.1-201ENST00000547580 377 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC135626.1-201ENST00000556983 435 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC027281.1-201ENST00000574178 758 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 MIR5095-201ENST00000578844 88 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 OR7A8P-201ENST00000595427 913 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC005034.4-201ENST00000603612 899 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC139493.1-201ENST00000604368 397 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AL359535.1-201ENST00000612100 1087 ntBASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
PDZRN3Q9UPQ7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
PDZRN3Q9UPQ7 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.59□□□□□ -1.04
PDZRN3Q9UPQ7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC068733.2-201ENST00000605434 1418 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 RNU6-500P-201ENST00000362349 107 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 SUGT1P2-201ENST00000379452 992 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 RNU6-413P-201ENST00000384115 107 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 RN7SKP129-201ENST00000410288 299 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC018644.1-201ENST00000429934 551 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC016691.1-201ENST00000441321 413 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC011742.2-201ENST00000443818 352 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 TRIM60P16-201ENST00000444048 694 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 RPL6P5-201ENST00000445678 828 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 RPL31P15-201ENST00000449770 338 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC079776.3-201ENST00000450665 370 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 MEF2AP1-201ENST00000454867 863 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC010301.1-201ENST00000473936 355 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC005017.1-201ENST00000482002 490 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 OR2A3P-201ENST00000493774 953 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 NPM1P27-201ENST00000502784 830 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC105252.1-201ENST00000503089 286 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC008837.1-201ENST00000511513 412 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC011352.2-201ENST00000514574 1016 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 OR5AQ1P-201ENST00000527596 927 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AP000662.1-201ENST00000530952 487 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 NXPE2P1-201ENST00000543705 726 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 HIGD1AP17-201ENST00000554576 276 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AL845552.1-201ENST00000556820 323 ntBASIC8.58□□□□□ -1.04
PDZRN3Q9UPQ7 AC011270.1-201ENST00000558606 583 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms