Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 RNU6-1304P-201ENST00000411374 106 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AL359633.1-201ENST00000421403 310 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 HSPE1P1-201ENST00000421494 318 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 ANXA2P2-201ENST00000435128 1020 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC104058.1-201ENST00000448028 297 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 VN1R6P-201ENST00000458417 907 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC092324.1-201ENST00000468671 324 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 RANP9-201ENST00000519957 271 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 APOOP3-201ENST00000536787 586 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC103968.1-201ENST00000557841 573 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 EEF1B2P1-201ENST00000567221 672 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 RPSAP66-201ENST00000592196 606 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC104687.2-201ENST00000604442 342 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC115621.1-201ENST00000604653 858 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC104695.2-201ENST00000605056 775 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AL121782.1-201ENST00000611242 413 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC078899.5-201ENST00000612475 178 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 pRNA.9-201ENST00000618609 89 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 RMST_5.1-201ENST00000618704 126 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC006840.1-201ENST00000623069 542 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 AC063952.1-203ENST00000634410 658 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 OR7E161P-202ENST00000641994 1033 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 NPL-203ENST00000367553 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 EEF1A1P16-201ENST00000325349 1414 ntBASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 DDX3Y-202ENST00000360160 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TRIM35Q9UPQ4 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TRIM35Q9UPQ4 AC009948.5-201ENST00000624360 4406 ntBASIC9.46□□□□□ -0.89
TRIM35Q9UPQ4 U3.14-201ENST00000365363 227 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 HNRNPDLP1-201ENST00000412834 550 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 PPIAP23-201ENST00000420099 497 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC134879.1-201ENST00000426062 394 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AL138479.1-201ENST00000426913 484 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 BLOC1S2P1-201ENST00000428431 301 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 NPM1P34-201ENST00000428821 893 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC005033.1-201ENST00000428904 813 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 KRTAP3-4P-201ENST00000430780 280 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 ZDHHC20P1-204ENST00000435787 423 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 FABP5P14-201ENST00000437273 393 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 GLRXP3-201ENST00000470810 321 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC107398.1-201ENST00000486904 505 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC098591.2-201ENST00000510152 315 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 MTND5P4-201ENST00000514978 288 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 RNA5SP216-201ENST00000516111 123 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 RNY3P15-201ENST00000516297 97 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 RGS5-220ENST00000528689 566 ntTSL 5 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AL121809.2-201ENST00000613169 341 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 NF1P8-201ENST00000415351 1461 ntBASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
TRIM35Q9UPQ4 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TRIM35Q9UPQ4 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms