Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTNNA3Q9UI47 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 Z95331.1-201ENST00000623075 23112 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 RN7SKP97-201ENST00000410966 333 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 CEACAMP10-202ENST00000495431 496 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC092490.3-201ENST00000545370 572 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AL512310.9-201ENST00000553311 948 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC133644.2-201ENST00000608142 540 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC100827.5-201ENST00000615883 426 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC074140.1-201ENST00000621617 208 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AC010435.1-201ENST00000623353 1177 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 AP002799.1-201ENST00000623552 423 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 NXF4-202ENST00000416098 1465 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 PCAT14-202ENST00000627127 3935 ntBASIC6.06□□□□□ -1.44
CTNNA3Q9UI47 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AC093591.2-201ENST00000565254 3843 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 MTND5P23-201ENST00000430812 1655 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 SNURFL-201ENST00000309296 343 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 SNORA79B-201ENST00000410557 148 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 RNU6-233P-201ENST00000410845 141 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AL354714.3-201ENST00000447284 493 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AP001922.4-201ENST00000526967 290 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 AC006116.3-201ENST00000592968 361 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 LINC01739-205ENST00000641890 573 ntBASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CTNNA3Q9UI47 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 MTCO1P46-201ENST00000451639 1491 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 U3.32-201ENST00000408116 212 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 PTP4A1P1-201ENST00000420539 515 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 NDUFA5P8-201ENST00000449019 346 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AC239798.3-201ENST00000454459 408 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 RPS29P22-201ENST00000472363 168 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 HMGN2P25-201ENST00000486956 268 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 RN7SL244P-201ENST00000493405 297 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 NMNAT1P1-201ENST00000554095 876 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 MIR3691-201ENST00000578066 90 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 MIR4436B2-201ENST00000581415 91 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 MIR4436B1-201ENST00000583272 91 ntBASIC6.04□□□□□ -1.44
CTNNA3Q9UI47 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms