Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 ADAM24P-201ENST00000398655 2101 ntBASIC6.15□□□□□ -1.42
SCN11AQ9UI33 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCN11AQ9UI33 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 MIR659-201ENST00000384963 97 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 SNORA57.1-201ENST00000391227 145 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC079809.1-201ENST00000415468 276 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 RPEP3-201ENST00000425462 676 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC009963.4-201ENST00000448535 339 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 Z95152.1-201ENST00000453556 656 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC068831.4-201ENST00000556118 109 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AL121932.1-201ENST00000605542 214 ntBASIC6.15□□□□□ -1.43
SCN11AQ9UI33 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.15□□□□□ -1.43
SCN11AQ9UI33 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 MTCO1P15-201ENST00000529569 1526 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 SNORA71.2-201ENST00000364941 134 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 AL592293.2-201ENST00000422292 996 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 CYCSP24-201ENST00000445119 316 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 AK3P4-201ENST00000504283 583 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 PARP1P2-201ENST00000556806 195 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 SNORA74C-1-201ENST00000580726 201 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 AL450345.1-202ENST00000605741 3881 ntBASIC6.14□□□□□ -1.43
SCN11AQ9UI33 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCN11AQ9UI33 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AL591848.1-201ENST00000413092 322 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 UQCRBP1-201ENST00000421129 336 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC234779.1-201ENST00000425910 285 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC023141.6-201ENST00000429418 337 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC109327.1-201ENST00000471666 403 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AL049830.4-201ENST00000555149 351 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC100847.1-201ENST00000611316 481 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC011815.3-201ENST00000624194 473 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC006453.5-201ENST00000636451 619 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC093671.1-201ENST00000624981 2929 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC025574.1-201ENST00000554784 1653 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AL354766.1-201ENST00000423396 542 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 AL451139.1-201ENST00000434718 346 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 MRPL35P2-201ENST00000448009 511 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 RN7SL558P-201ENST00000497468 299 ntBASIC6.13□□□□□ -1.43
SCN11AQ9UI33 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.13□□□□□ -1.43
SCN11AQ9UI33 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SCN11AQ9UI33 AL034370.1-201ENST00000397254 1590 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms