Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR937-201ENST00000401271 86 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 UBE2V1P9-201ENST00000414760 368 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 HYALP1-201ENST00000417674 1279 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC006065.1-201ENST00000422539 802 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC073310.1-201ENST00000423226 1033 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 PTP4A1P7-201ENST00000423476 514 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 NDUFB4P8-201ENST00000435351 367 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 RN7SKP141-201ENST00000516167 338 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 HAUS1P3-201ENST00000523909 662 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL158211.1-201ENST00000566763 763 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC090666.1-201ENST00000578241 445 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC084373.1-201ENST00000603311 235 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC095055.1-201ENST00000603472 1113 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC244107.2-201ENST00000611773 76 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC068787.1-201ENST00000623908 691 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL20A1Q9P218 ZNF733P-202ENST00000444809 1573 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 AC079097.1-201ENST00000512187 1399 ntBASIC6.06□□□□□ -1.44
COL20A1Q9P218 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL20A1Q9P218 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 SAMMSON-210ENST00000641260 1308 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 SNORA17.1-201ENST00000362945 126 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 MIR105-1-201ENST00000385222 81 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AP002784.2-201ENST00000397300 549 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 UBE2V1P11-201ENST00000411559 285 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 PTP4A1P1-201ENST00000420539 515 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC241520.1-201ENST00000422654 1099 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 MTCO2P17-201ENST00000424336 677 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AL590762.4-201ENST00000425885 253 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 NDUFA5P10-201ENST00000432147 357 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 Z80107.1-201ENST00000436830 412 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 PA2G4P6-201ENST00000438325 1197 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 Z92846.1-201ENST00000456203 268 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 PRELID3BP6-201ENST00000503839 571 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL20A1Q9P218 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AL121652.1-201ENST00000608851 448 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 MIR6730-201ENST00000622213 67 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AP000770.2-201ENST00000623694 100 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL20A1Q9P218 CASC19-222ENST00000641321 1173 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC239868.2-201ENST00000564237 4527 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC007342.7-201ENST00000624610 2337 ntBASIC6.05□□□□□ -1.44
COL20A1Q9P218 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL20A1Q9P218 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL20A1Q9P218 AP000432.2-201ENST00000624164 2048 ntBASIC6.04□□□□□ -1.44
COL20A1Q9P218 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
COL20A1Q9P218 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL20A1Q9P218 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms