Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL049794.2-201ENST00000616301 365 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 AC015660.5-201ENST00000623238 564 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 OR52B5P-202ENST00000641118 1110 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 ZNF733P-202ENST00000444809 1573 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 ECM1P2-201ENST00000503354 1577 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LRTM1Q9HBL6 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 SNORA66-201ENST00000384792 133 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 RPA2P2-201ENST00000419698 796 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 TRGV5P-201ENST00000419915 354 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 DDX39BP1-205ENST00000422507 192 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 SCAND3P1-201ENST00000439854 1060 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC245047.2-201ENST00000441060 530 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 CEACAMP7-201ENST00000444105 496 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC092647.2-201ENST00000452998 253 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 RN7SL517P-201ENST00000462240 305 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC097484.1-201ENST00000471148 389 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC079841.1-201ENST00000481228 950 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 RNA5SP228-201ENST00000516232 133 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC022832.1-201ENST00000530718 645 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 NMNAT1P1-201ENST00000554095 876 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 EIF1P5-201ENST00000585002 234 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AP002884.5-201ENST00000595053 1132 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC009643.2-201ENST00000603543 1448 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC087783.2-201ENST00000605070 562 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC126915.2-201ENST00000610957 190 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC090510.2-201ENST00000617465 629 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 AC026523.2-201ENST00000625039 7739 ntBASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LRTM1Q9HBL6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 DDX18P5-201ENST00000534547 1306 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 AL136116.2-201ENST00000404020 785 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 RN7SKP213-201ENST00000410746 298 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 OR7E125P-201ENST00000443450 846 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 EEF1B2P5-201ENST00000444820 548 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 AL031584.1-201ENST00000447169 754 ntBASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRTM1Q9HBL6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms