Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RN7SL583P-201ENST00000475692 287 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 HMGB1P38-201ENST00000490557 577 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 OR5H3P-201ENST00000502817 919 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RNA5SP34-201ENST00000516887 130 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC034205.1-201ENST00000520621 638 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC021451.1-201ENST00000523498 1129 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC118942.1-201ENST00000529674 1035 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 OR4A43P-201ENST00000532938 908 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 MIR4433B-201ENST00000581329 102 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC211433.2-201ENST00000608433 387 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 CYCSP41-201ENST00000616920 296 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 AC078880.5-201ENST00000617845 421 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 HSPA8P14-201ENST00000552265 1805 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 MTND5P23-201ENST00000430812 1655 ntBASIC5.69□□□□□ -1.5
USP29Q9HBJ7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
USP29Q9HBJ7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 OR9K1P-201ENST00000326513 941 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 RNU6-252P-201ENST00000363232 107 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 SNORA70.6-201ENST00000383934 134 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 SNORD65-201ENST00000391079 73 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 GPS2P1-201ENST00000411761 986 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC113412.1-201ENST00000425840 504 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL662874.1-201ENST00000426065 230 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 FO393414.1-201ENST00000428697 1184 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL450996.1-201ENST00000445574 1202 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL009048.1-201ENST00000450437 298 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC092691.2-201ENST00000461787 803 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 PSAT1P4-201ENST00000466500 526 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 SUMO1P1-201ENST00000497904 306 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC139103.1-201ENST00000534696 1030 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL512310.9-201ENST00000553311 948 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC008115.3-201ENST00000614874 549 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC015722.2-201ENST00000622210 551 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AL590396.4-201ENST00000636779 956 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC144833.1-201ENST00000567953 4089 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 MRRFP1-201ENST00000435941 1675 ntBASIC5.68□□□□□ -1.5
USP29Q9HBJ7 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP29Q9HBJ7 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 AC100757.1-201ENST00000616872 1835 ntBASIC5.67□□□□□ -1.5
USP29Q9HBJ7 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP29Q9HBJ7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms