Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC005294.1-201ENST00000355509 281 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RNA5SP335-201ENST00000363817 110 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RN7SKP59-201ENST00000410520 314 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RNU4-74P-201ENST00000411280 161 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 SRSF1P1-201ENST00000424058 520 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RPL12P28-201ENST00000430852 489 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC011225.1-201ENST00000457751 369 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RPL7P40-201ENST00000481703 745 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC116562.1-201ENST00000485355 781 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RPS21P4-201ENST00000487122 248 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AL359513.1-201ENST00000614364 557 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC008115.4-201ENST00000619780 775 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC004808.2-201ENST00000627965 773 ntBASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 TRIM60P13-201ENST00000432350 1283 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 IFNWP4-201ENST00000453148 294 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 AP000942.1-201ENST00000463969 747 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AP000797.2-201ENST00000475768 606 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 RN7SL30P-201ENST00000488416 306 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 IGLV2-28-201ENST00000520681 304 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC068993.1-201ENST00000546724 589 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC004825.1-201ENST00000555068 586 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AL512329.2-201ENST00000607350 548 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC243654.2-201ENST00000612843 443 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC109583.2-201ENST00000617367 129 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC024023.1-201ENST00000624530 922 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 AC004656.1-201ENST00000568479 4951 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4AQ9BY43 CCT8P1-201ENST00000413611 1657 ntBASIC7□□□□□ -1.29
CHMP4AQ9BY43 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4AQ9BY43 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 ATP5HP3-201ENST00000396994 486 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL390774.1-201ENST00000411924 246 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 MTND2P21-201ENST00000436242 1042 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 TPMTP4-201ENST00000450749 678 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC108751.3-201ENST00000461814 1020 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 RNU6-347P-201ENST00000516658 105 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC037198.3-201ENST00000616754 526 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AL162233.1-201ENST00000620014 944 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 AC073869.8-201ENST00000641806 335 ntBASIC6.99□□□□□ -1.29
CHMP4AQ9BY43 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms