Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RAD1P2-201ENST00000446414 663 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RPL7L1P1-201ENST00000448259 785 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RHEBP2-201ENST00000450289 600 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 MTCYBP14-201ENST00000457471 715 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RN7SL443P-201ENST00000464331 290 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 SIAH1P1-201ENST00000479411 923 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC112184.1-201ENST00000505179 312 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AL049874.4-201ENST00000557593 255 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 MIR1273E-201ENST00000581165 102 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 MIR4505-201ENST00000582238 73 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 WBP1LP8-201ENST00000617401 327 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC025262.3-201ENST00000623666 360 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 KPNA2P2-201ENST00000419546 1489 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 AC092111.2-201ENST00000611627 1414 ntBASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 AC093775.1-201ENST00000624154 1868 ntBASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 AC107068.1-201ENST00000563286 4218 ntBASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.9□□□□□ -1.62
CCDC28BQ9BUN5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 RNA5SP234-201ENST00000363916 119 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 MIR1182-201ENST00000408363 97 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 QRSL1P2-201ENST00000418582 964 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL034379.1-201ENST00000423216 253 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 BTBD7P2-201ENST00000441962 620 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 NDUFA5P8-201ENST00000449019 346 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 RPL7P6-201ENST00000480903 738 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL117692.1-201ENST00000494283 713 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC025423.2-201ENST00000537570 439 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 SNRPGP1-201ENST00000553864 222 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AL118508.4-201ENST00000624142 1176 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC055839.1-201ENST00000634467 498 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 AC108751.5-201ENST00000492880 1336 ntBASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC28BQ9BUN5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 CASC19-206ENST00000641028 1430 ntBASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 AL589826.1-201ENST00000340697 249 ntBASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC28BQ9BUN5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms