Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 POU5F1P5-201ENST00000445059 658 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 OR52E3P-201ENST00000452083 936 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 RANP1-206ENST00000455094 651 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AKR1D1P1-201ENST00000457236 936 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 RPL31P3-201ENST00000458430 332 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC018475.1-201ENST00000478358 465 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC111000.2-201ENST00000507775 550 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC105384.2-201ENST00000508433 640 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 XKRY-201ENST00000510392 1100 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 MAST4-IT1-201ENST00000514241 658 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 FTH1P11-201ENST00000517577 551 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 AP003033.1-201ENST00000527244 415 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC084824.1-201ENST00000550917 1005 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.87□□□□□ -1.79
LITAFQ99732 NMNAT1P5-201ENST00000559657 841 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC040958.1-201ENST00000561102 201 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC3.87□□□□□ -1.79
LITAFQ99732 MRPS21P8-201ENST00000569196 235 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 RN7SL131P-201ENST00000579043 256 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC024451.4-201ENST00000602578 752 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC105129.3-201ENST00000605455 485 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC090425.2-201ENST00000608818 501 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 TP53TG1_2.1-201ENST00000611226 182 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AL354976.1-201ENST00000613843 387 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC096861.1-201ENST00000616652 240 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC010320.5-201ENST00000619124 676 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC241377.1-201ENST00000619797 406 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 AC013489.3-201ENST00000623274 517 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 OXSM-209ENST00000626005 309 ntTSL 3 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 NEK3-211ENST00000629912 141 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 MFSD8-245ENST00000641743 948 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
LITAFQ99732 SAMMSON-227ENST00000642114 1199 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LITAFQ99732 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 TTC39DP-201ENST00000416781 1688 ntBASIC3.87□□□□□ -1.79
LITAFQ99732 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.87□□□□□ -1.79
LITAFQ99732 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LITAFQ99732 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.87□□□□□ -1.79
LITAFQ99732 AC107021.2-201ENST00000567714 2095 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.86□□□□□ -1.79
LITAFQ99732 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.86□□□□□ -1.79
LITAFQ99732 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 AC092681.1-201ENST00000297369 291 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 OR9K1P-201ENST00000326513 941 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 AC008549.2-201ENST00000333482 706 ntBASIC3.86□□□□□ -1.79
LITAFQ99732 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LITAFQ99732 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms