Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC012400.1-201ENST00000518452 381 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RPL21P7-201ENST00000557463 483 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC079315.1-201ENST00000602952 623 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC067773.1-201ENST00000603284 1094 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC087468.1-201ENST00000604365 630 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC026979.4-201ENST00000606555 645 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC092747.4-201ENST00000620519 1861 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-368P-201ENST00000620928 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNU6-538P-201ENST00000622329 107 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC012020.1-201ENST00000624541 1728 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 AC018529.3-201ENST00000624212 2254 ntBASIC3.74□□□□□ -1.81
AP1S3Q96PC3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP1S3Q96PC3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 MIR133B-201ENST00000362210 119 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RN7SKP104-201ENST00000362605 328 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RN7SKP113-201ENST00000363891 295 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RNA5SP122-201ENST00000384457 108 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 MIR708-201ENST00000390708 88 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RNA5SP372-201ENST00000390836 115 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL645733.1-201ENST00000402250 217 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 U3.32-201ENST00000408116 212 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 SLC20A1P1-201ENST00000413906 956 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 EEF1B2P8-201ENST00000414101 671 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC092570.3-201ENST00000420113 693 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 PLA2G12AP2-201ENST00000424744 264 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RPS26P2-201ENST00000440331 348 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC073476.1-201ENST00000452854 407 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC108161.1-201ENST00000461060 402 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 RNA5SP228-201ENST00000516232 133 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC122134.1-201ENST00000565664 1104 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CCDC58P1-201ENST00000578567 430 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC015908.5-201ENST00000623289 343 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 AC135068.12-201ENST00000637370 931 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 CASC19-222ENST00000641321 1173 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 HSPA8P17-201ENST00000427029 1382 ntBASIC3.73□□□□□ -1.81
AP1S3Q96PC3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
AP1S3Q96PC3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
AP1S3Q96PC3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms