Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 C4BPAP1-201ENST00000415474 1893 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 CR382285.2-201ENST00000624662 1495 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 AP000542.2-201ENST00000623199 6179 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AL929601.4-201ENST00000613011 1341 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC126323.6-202ENST00000568092 3511 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC053481.2-202ENST00000582394 1500 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 RPL23P2-201ENST00000320371 421 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 SNORA2.3-201ENST00000383920 135 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 RN7SKP125-201ENST00000410481 302 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC244033.1-201ENST00000426826 870 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC093166.2-201ENST00000455969 1017 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC005532.2-201ENST00000467154 373 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 RN7SL799P-201ENST00000475891 298 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 NPM1P29-201ENST00000483112 803 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 BTG4P1-201ENST00000510421 183 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AP002373.2-201ENST00000541631 1060 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 OR11J2P-201ENST00000555298 907 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 NDUFB4P11-201ENST00000560510 395 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC010547.7-201ENST00000570323 333 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC008536.1-201ENST00000602872 669 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC013244.1-201ENST00000604279 193 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.74□□□□□ -1.65
COL21A1Q96P44 MIR8069-1-201ENST00000616627 86 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 MIR8069-2-201ENST00000621412 86 ntBASIC4.74□□□□□ -1.65
COL21A1Q96P44 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL21A1Q96P44 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 RN7SKP113-201ENST00000363891 295 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL21A1Q96P44 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 RN7SKP273-201ENST00000411392 314 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC002524.1-201ENST00000411687 547 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 EEF1B2P5-201ENST00000444820 548 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AP000942.1-201ENST00000463969 747 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 RN7SL443P-201ENST00000464331 290 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC112206.1-201ENST00000468416 477 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 RN7SL727P-201ENST00000482164 296 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC108043.1-201ENST00000512696 574 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 RN7SKP260-201ENST00000516907 149 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC011447.4-201ENST00000587562 111 ntBASIC4.73□□□□□ -1.65
COL21A1Q96P44 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms