Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 MIR143-201ENST00000385300 106 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC087752.1-201ENST00000391360 558 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL592310.1-201ENST00000414330 671 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC008173.1-201ENST00000418901 264 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 PNRC2P1-201ENST00000423940 420 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 MTND6P12-201ENST00000428247 522 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 HMGB3P10-201ENST00000434734 572 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 NDUFS5P5-201ENST00000437256 321 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 ARF4P4-201ENST00000439608 520 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC073109.1-201ENST00000445066 978 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC099063.2-201ENST00000446360 662 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 EIF2S2P2-201ENST00000447161 982 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 PDCL3P4-201ENST00000489621 720 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC106872.4-201ENST00000510050 523 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 OR8A2P-201ENST00000528631 952 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC090424.1-201ENST00000535243 736 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 CYB5AP5-201ENST00000549779 389 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC068305.2-201ENST00000550567 1205 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 IGBP1P1-201ENST00000554337 1009 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC122134.1-201ENST00000565664 1104 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 MIR3614-201ENST00000581261 86 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC012254.4-201ENST00000588843 273 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC006272.2-201ENST00000594725 163 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC007786.3-201ENST00000615154 596 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL669942.2-201ENST00000620352 697 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AL022322.2-201ENST00000624072 20397 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 AC130304.1-201ENST00000622942 2385 ntBASIC5.59□□□□□ -1.51
VPS50Q96JG6 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VPS50Q96JG6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.59□□□□□ -1.52
VPS50Q96JG6 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.59□□□□□ -1.52
VPS50Q96JG6 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.59□□□□□ -1.52
VPS50Q96JG6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.59□□□□□ -1.52
VPS50Q96JG6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.59□□□□□ -1.52
VPS50Q96JG6 SAMMSON-213ENST00000641336 1521 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC027228.2-201ENST00000567141 2154 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL603865.2-201ENST00000401679 213 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC010385.1-201ENST00000412374 256 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 RPS26P13-201ENST00000419030 330 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC115285.1-201ENST00000424879 736 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC099677.3-201ENST00000427081 395 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC093422.3-201ENST00000428506 305 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 MTND2P5-201ENST00000432656 1006 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL161636.2-201ENST00000445179 927 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL157827.1-201ENST00000447622 132 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 FRG2FP-204ENST00000453982 852 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 OR2AF1P-201ENST00000454899 889 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 MTCYBP35-201ENST00000503630 1137 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC008629.2-201ENST00000503783 483 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 CYCSP22-201ENST00000517555 339 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC112191.2-201ENST00000522428 333 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 MORF4L1P3-201ENST00000525966 950 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 MTCYBP23-201ENST00000558717 1102 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AL356801.1-201ENST00000559320 294 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 MIR4675-201ENST00000577898 77 ntBASIC5.58□□□□□ -1.52
VPS50Q96JG6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS50Q96JG6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms