Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC090638.1-201ENST00000498296 909 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC060775.1-201ENST00000518241 520 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP000648.1-201ENST00000529682 397 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC022882.1-201ENST00000532142 501 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 NOP56P3-201ENST00000549457 385 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC027176.2-201ENST00000559166 746 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC021483.2-201ENST00000567415 758 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC067773.1-201ENST00000603284 1094 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AL031601.1-201ENST00000605702 394 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 MIR6071-201ENST00000616741 78 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC244100.4-201ENST00000617747 388 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AP005431.1-201ENST00000618479 319 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC073593.1-201ENST00000624500 411 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 AC107027.3-201ENST00000565095 3473 ntBASIC4.71□□□□□ -1.66
RFT1Q96AA3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFT1Q96AA3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.71□□□□□ -1.66
RFT1Q96AA3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 ZNF733P-202ENST00000444809 1573 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC005332.5-201ENST00000591222 2919 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 RNU1-19P-201ENST00000363306 165 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 RNA5SP394-201ENST00000364216 119 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 OR7E101P-201ENST00000400428 513 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC007161.1-204ENST00000423039 460 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL389925.1-201ENST00000432257 728 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 HMGB3P9-201ENST00000441799 583 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL450023.1-201ENST00000450868 751 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL353718.1-201ENST00000451028 517 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 VDAC2P4-201ENST00000452925 711 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 CDH12P2-201ENST00000504393 298 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 RNU6-615P-201ENST00000516065 106 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 TRIM77BP-201ENST00000524985 1119 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 SULT1C2P2-201ENST00000562517 294 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 MRPS21P7-201ENST00000566937 238 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC004775.1-201ENST00000607389 753 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 MIR7109-201ENST00000613748 65 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL356094.1-201ENST00000624663 1212 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AL596275.2-207ENST00000641188 675 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC073869.8-201ENST00000641806 335 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC079298.1-201ENST00000625026 1619 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC114786.1-201ENST00000512892 1415 ntBASIC4.7□□□□□ -1.66
RFT1Q96AA3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.7□□□□□ -1.66
RFT1Q96AA3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFT1Q96AA3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms