Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 Y_RNA.395-201ENST00000383945 109 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 Y_RNA.452-201ENST00000384202 108 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 MIR498-201ENST00000385134 124 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 RNU6-1158P-201ENST00000391167 107 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AL391419.1-201ENST00000398901 1275 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 RPS20P2-201ENST00000402520 389 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC7.65□□□□□ -1.18
HLA-CQ95604 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 AL357752.1-201ENST00000412817 349 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 RPL23AP4-201ENST00000427757 463 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AL445933.1-201ENST00000434240 2242 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AL627308.1-201ENST00000435693 821 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-CQ95604 TXNP5-201ENST00000441043 315 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-CQ95604 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 MEMO1P4-201ENST00000453590 386 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 RNU6-329P-201ENST00000459618 107 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 RPL12P31-201ENST00000478433 450 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AC008496.1-201ENST00000509131 295 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC002456.2-201ENST00000509356 380 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 OR51A1P-201ENST00000511110 946 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC093816.1-201ENST00000515076 913 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 Y_RNA.720-201ENST00000517166 92 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 IGLV1-62-201ENST00000518003 441 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 BTF3P12-201ENST00000519620 469 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC022861.1-201ENST00000522981 663 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 OR8A2P-201ENST00000528631 952 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
HLA-CQ95604 DPPA3P2-202ENST00000557188 1219 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC068714.1-201ENST00000559623 800 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.65□□□□□ -1.18
HLA-CQ95604 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AC010327.2-201ENST00000587647 488 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AL080274.1-201ENST00000605565 220 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AL161420.1-201ENST00000619393 264 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC040168.1-201ENST00000623594 991 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AL161912.4-201ENST00000623889 2468 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC090617.10-201ENST00000624308 134 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 AC003973.3-201ENST00000624863 2822 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 AC119674.1-207ENST00000641355 633 ntBASIC7.65□□□□□ -1.18
HLA-CQ95604 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.65□□□□□ -1.19
HLA-CQ95604 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.65□□□□□ -1.19
HLA-CQ95604 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
HLA-CQ95604 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
HLA-CQ95604 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
HLA-CQ95604 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.65□□□□□ -1.19
HLA-CQ95604 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HLA-CQ95604 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HLA-CQ95604 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HLA-CQ95604 RNA5SP176-201ENST00000390956 110 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 HMGB1P17-201ENST00000403495 628 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 RPL7P25-201ENST00000404151 721 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 SNORA3.1-201ENST00000408166 111 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 GAPDHP53-201ENST00000458397 924 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC027575.1-201ENST00000481064 460 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC233724.1-201ENST00000503894 233 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 RNU6-1314P-201ENST00000517139 104 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AP003181.2-201ENST00000528941 181 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 OR5M2P-201ENST00000529003 936 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC7.64□□□□□ -1.19
HLA-CQ95604 AC009117.1-201ENST00000563948 554 ntBASIC7.64□□□□□ -1.19
HLA-CQ95604 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms