Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL035458.1-201ENST00000433096 585 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL772161.1-201ENST00000439130 476 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RPS23P9-201ENST00000448848 438 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RPL7P61-201ENST00000451721 751 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 snoU109.3-201ENST00000459477 145 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 RPL35AP28-201ENST00000459730 331 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 HMGB1P40-201ENST00000525121 540 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AL513327.3-201ENST00000602618 469 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 MIR6748-201ENST00000610433 71 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC009163.6-201ENST00000612367 342 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AP004607.9-201ENST00000618202 316 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 AC131971.1-201ENST00000332881 1482 ntBASIC5.56□□□□□ -1.52
HMGB4Q8WW32 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGB4Q8WW32 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 PROS2P-201ENST00000474651 1951 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC106754.1-201ENST00000562632 1513 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC092070.2-203ENST00000598377 3644 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RNA5SP443-201ENST00000363083 132 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RNU1-43P-201ENST00000365052 165 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SNORA16A-201ENST00000384342 137 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RNU6-729P-201ENST00000384399 107 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL589647.1-201ENST00000402485 466 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL121835.1-201ENST00000404250 354 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL133388.1-201ENST00000404509 287 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RN7SKP216-201ENST00000411050 312 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 UBE2V1P11-201ENST00000411559 285 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 OR13Z1P-201ENST00000416141 834 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 PTP4A1P7-201ENST00000423476 514 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC115285.1-201ENST00000424879 736 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC091685.2-201ENST00000454924 864 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RPS7P6-201ENST00000485777 579 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC111000.6-201ENST00000514471 709 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AL158211.1-201ENST00000566763 763 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC069431.2-201ENST00000604149 1099 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC090506.2-201ENST00000624521 419 ntBASIC5.55□□□□□ -1.52
HMGB4Q8WW32 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGB4Q8WW32 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 AC103591.2-201ENST00000265259 766 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RNU1-106P-201ENST00000384382 164 ntBASIC5.54□□□□□ -1.52
HMGB4Q8WW32 RNU1-149P-201ENST00000390870 161 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms