Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC010287.1-201ENST00000566916 357 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AC106785.4-201ENST00000569492 412 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 MIR3913-1-201ENST00000577744 102 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AP001542.2-201ENST00000593141 364 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 BNIP3P22-201ENST00000593399 556 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 HTR1DP1-201ENST00000616500 888 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 MRPL57P3-201ENST00000619218 176 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AL160413.1-201ENST00000622780 310 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AL450226.2-201ENST00000622913 439 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AL132796.3-201ENST00000624703 900 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 MAPK10-357ENST00000641831 2858 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 KARSP1-201ENST00000451871 1752 ntBASIC6.11□□□□□ -1.43
ATG4DQ86TL0 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4DQ86TL0 AC007012.2-201ENST00000623206 1676 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 CR383658.2-201ENST00000547576 1525 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RNU6-254P-201ENST00000363377 107 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RNU6-374P-201ENST00000364146 108 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SNORA4.1-201ENST00000364263 144 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC092634.1-201ENST00000366505 199 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RNU6-297P-201ENST00000384636 107 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 Y_RNA.573-201ENST00000384763 105 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MTCO3P40-201ENST00000392516 676 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RN7SKP188-201ENST00000410789 317 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RPLP1P10-201ENST00000413972 339 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC069157.1-201ENST00000421749 137 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RPL7P31-201ENST00000450192 724 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AL139156.3-201ENST00000454802 394 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 YRDCP3-201ENST00000456507 480 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RN7SL372P-201ENST00000461982 298 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 RPL30P9-201ENST00000465586 330 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 MRPL57P6-201ENST00000506570 309 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 HMGB1P44-201ENST00000508597 572 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 SNRPCP6-201ENST00000528310 210 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 CHEK2P2-201ENST00000554701 672 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC090826.1-203ENST00000569235 490 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 PPIAP14-201ENST00000577627 496 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 COX6CP4-201ENST00000605798 228 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC011373.1-201ENST00000607270 237 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC244100.4-201ENST00000617747 388 ntBASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4DQ86TL0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms