Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RN7SKP113-201ENST00000363891 295 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-1320P-201ENST00000390838 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-1269P-201ENST00000391139 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 OR1F12-201ENST00000402365 945 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AL137845.2-201ENST00000444292 988 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 BUD31P2-201ENST00000449374 300 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 SEPT7P3-201ENST00000455017 621 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-599P-201ENST00000459383 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-1193P-201ENST00000459461 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC092905.1-201ENST00000467527 949 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RN7SL385P-201ENST00000468873 276 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 HPRT1P1-201ENST00000509498 657 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-491P-201ENST00000516099 110 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 SCARNA20.4-201ENST00000516969 131 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC026688.1-201ENST00000520639 1168 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AP006289.1-201ENST00000538089 277 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 NMNAT1P1-201ENST00000554095 876 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC092868.3-201ENST00000560515 784 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC091042.1-201ENST00000579213 173 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MIR6780A-201ENST00000615089 68 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-368P-201ENST00000620928 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 RNU6-538P-201ENST00000622329 107 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 LINC00216-201ENST00000623548 1126 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 AC079097.1-201ENST00000512187 1399 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MTCO1P7-201ENST00000419523 1542 ntBASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LYSMD4Q5XG99 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 RNA5SP505-201ENST00000364748 108 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 SNORA62-201ENST00000365493 153 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 MIR421-201ENST00000365696 85 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 RNA5SP105-201ENST00000391123 113 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 REREP1Y-201ENST00000422655 198 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 VDAC1P6-201ENST00000430062 855 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC016712.1-201ENST00000431088 378 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 FTLP19-201ENST00000433300 394 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 REREP2Y-201ENST00000439103 200 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 OR52J1P-201ENST00000450596 932 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AL513533.1-201ENST00000453728 415 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC104629.2-201ENST00000468627 598 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 RN7SL319P-201ENST00000480656 221 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 RPL23AP72-201ENST00000492447 435 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC091912.1-201ENST00000511351 248 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC006427.1-201ENST00000514359 712 ntBASIC5.1□□□□□ -1.59
LYSMD4Q5XG99 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms