Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.26□□□□□ -1.09
VARS2Q5ST30 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.26□□□□□ -1.09
VARS2Q5ST30 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
VARS2Q5ST30 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 CTAGE3P-201ENST00000454280 2404 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 MAPK10-285ENST00000641207 2746 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 VPS35P1-201ENST00000563400 1518 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 Y_RNA.210-201ENST00000364161 110 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNU6-522P-201ENST00000364497 107 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 SNORA51.7-201ENST00000384171 134 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 SNORA70I-201ENST00000384544 135 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 MIR16-1-201ENST00000385271 89 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNU6-1093P-201ENST00000391194 107 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 IL6-203ENST00000401651 539 ntTSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC017035.1-201ENST00000411999 1115 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL354983.1-201ENST00000434580 906 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL137074.1-201ENST00000442640 465 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL161454.1-201ENST00000446226 569 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC104651.2-201ENST00000447549 528 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL356010.1-201ENST00000456364 102 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 HMGB1P35-201ENST00000503360 598 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC008638.1-201ENST00000506035 866 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNU6-566P-201ENST00000516790 107 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNU6-273P-201ENST00000516937 96 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNU6-1213P-201ENST00000517075 94 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC100823.2-201ENST00000518337 699 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 MTND6P19-201ENST00000519399 524 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 IGLVIV-59-201ENST00000520218 250 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 ARL1-211ENST00000551828 776 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 FDPSP3-201ENST00000556903 1013 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 MIR4790-201ENST00000577799 79 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC010323.2-201ENST00000596405 594 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC104763.2-201ENST00000604179 382 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL078624.2-201ENST00000605063 554 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 OR10AB1P-201ENST00000609613 938 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC069499.2-201ENST00000610665 382 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC135050.6-202ENST00000613584 392 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL669831.3-213ENST00000636676 183 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL512329.1-201ENST00000404600 1592 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 CD40LG-201ENST00000370628 1720 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 DIEXF-202ENST00000491415 8446 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 AL353763.2-201ENST00000623489 1903 ntBASIC8.25□□□□□ -1.09
VARS2Q5ST30 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.25□□□□□ -1.09
VARS2Q5ST30 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARS2Q5ST30 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARS2Q5ST30 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 FAM32BP-201ENST00000344033 333 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 RNU6-378P-201ENST00000384324 107 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 RNU6-769P-201ENST00000384407 104 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VARS2Q5ST30 RNU6-735P-201ENST00000410612 107 ntBASIC8.24□□□□□ -1.09
VARS2Q5ST30 ACTR3BP6-201ENST00000422332 1241 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms