Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC027308.1-201ENST00000517993 110 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 DUXAP5-201ENST00000529668 529 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC023538.1-201ENST00000534576 736 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC023050.2-201ENST00000544968 387 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC009097.3-201ENST00000563557 1018 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 MTCO1P40-201ENST00000574371 625 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC020916.2-201ENST00000591242 360 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC125494.2-201ENST00000602431 657 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC021749.1-201ENST00000604322 607 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC025588.2-201ENST00000604851 466 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 Z99289.3-201ENST00000605586 594 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC141002.1-201ENST00000607025 279 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC021755.4-201ENST00000616620 456 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 AC017104.5-201ENST00000637647 639 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 OR13C1P-202ENST00000641378 2919 ntBASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC144BQ3MJ40 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 HSPA8P17-201ENST00000427029 1382 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RNU6-317P-201ENST00000384031 107 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 BX510359.3-201ENST00000422168 306 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RPF2P1-201ENST00000424137 906 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AL731534.1-201ENST00000434711 269 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 GAPDHP48-201ENST00000436626 961 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 BMS1P10-201ENST00000443754 1120 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC112492.1-201ENST00000449607 712 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 NPM1P13-201ENST00000452663 865 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RPS26P39-201ENST00000469206 341 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RPL23AP44-201ENST00000482216 473 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 CYP4F27P-201ENST00000514557 494 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 RPA2P3-201ENST00000533268 770 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 MTND4LP24-201ENST00000572277 291 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 MIR3176-201ENST00000582210 90 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC090312.2-201ENST00000582687 378 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 MIR4443-201ENST00000585052 53 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC009237.15-201ENST00000610252 501 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AL355493.4-201ENST00000618530 292 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 VN1R7P-201ENST00000619242 903 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AL137067.2-201ENST00000621202 131 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AC006840.1-201ENST00000623069 542 ntBASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC144BQ3MJ40 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms