Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC090751.1-201ENST00000566966 267 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 BPTFP1-201ENST00000579209 492 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX6-1P78426 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC105227.2-201ENST00000615075 605 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC074140.1-201ENST00000621617 208 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AL157770.1-201ENST00000623049 439 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AL132640.3-201ENST00000630473 177 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
NKX6-1P78426 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC096656.1-201ENST00000623826 1364 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 AP005901.5-201ENST00000545779 1796 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX6-1P78426 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 AL161912.4-201ENST00000623889 2468 ntBASIC5.49□□□□□ -1.53
NKX6-1P78426 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
NKX6-1P78426 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX6-1P78426 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
NKX6-1P78426 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 SGO1P1-201ENST00000603525 1447 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AL606537.1-201ENST00000607258 2011 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NKX6-1P78426 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 HSPA8P17-201ENST00000427029 1382 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RNU6-707P-201ENST00000364647 95 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC093719.1-202ENST00000392735 373 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 TMSB4XP8-201ENST00000402089 135 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RNA5SP178-201ENST00000410380 128 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RN7SKP144-201ENST00000411108 279 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RNU6-575P-201ENST00000411326 105 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX6-1P78426 TMSB4XP6-201ENST00000415187 135 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC048351.1-201ENST00000420064 602 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC079355.1-201ENST00000421770 223 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 GTF2IP23-201ENST00000423746 351 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 TMSB4XP1-201ENST00000424567 135 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AL009174.1-201ENST00000426577 416 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 BRWD1P3-201ENST00000428816 390 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 GTF2IP7-202ENST00000436677 309 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AP000936.3-201ENST00000438127 255 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 ATP5LP2-201ENST00000440646 311 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC092647.3-201ENST00000443044 633 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 HMGB1P4-201ENST00000455362 567 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RPL7AP52-201ENST00000458096 790 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC026348.1-201ENST00000462549 1053 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 RN7SL177P-201ENST00000476596 299 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RN7SL369P-201ENST00000477138 299 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC090114.3-201ENST00000479267 829 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AL161747.1-201ENST00000480068 358 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 RPS4XP14-201ENST00000493072 781 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC090058.1-201ENST00000498788 435 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC106800.3-201ENST00000511389 308 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 AC027308.1-201ENST00000517993 110 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX6-1P78426 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX6-1P78426 PDCL2P2-201ENST00000533651 189 ntBASIC5.48□□□□□ -1.53
NKX6-1P78426 GCSHP4-201ENST00000538792 439 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms