Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.15□□□□□ -1.42
YBX1P67809 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.15□□□□□ -1.42
YBX1P67809 AC026898.1-201ENST00000586404 571 ntBASIC6.15□□□□□ -1.42
YBX1P67809 AC011500.1-201ENST00000601963 469 ntBASIC6.15□□□□□ -1.42
YBX1P67809 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.15□□□□□ -1.42
YBX1P67809 AC090970.3-201ENST00000612566 866 ntBASIC6.15□□□□□ -1.42
YBX1P67809 AC015922.4-201ENST00000612568 690 ntBASIC6.15□□□□□ -1.42
YBX1P67809 AC063943.3-201ENST00000615562 356 ntBASIC6.15□□□□□ -1.42
YBX1P67809 AC009120.7-201ENST00000623452 780 ntBASIC6.15□□□□□ -1.42
YBX1P67809 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
YBX1P67809 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
YBX1P67809 PPBPP2-201ENST00000513150 1362 ntBASIC6.15□□□□□ -1.43
YBX1P67809 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.15□□□□□ -1.43
YBX1P67809 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
YBX1P67809 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
YBX1P67809 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 AL133243.2-201ENST00000610331 1621 ntBASIC6.14□□□□□ -1.43
YBX1P67809 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 CUBNP3-201ENST00000457461 1784 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 AC112255.1-201ENST00000624070 2493 ntBASIC6.14□□□□□ -1.43
YBX1P67809 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
YBX1P67809 Y_RNA.70-201ENST00000362886 110 ntBASIC6.14□□□□□ -1.43
YBX1P67809 RNU6-560P-201ENST00000364007 108 ntBASIC6.14□□□□□ -1.43
YBX1P67809 RNU6-353P-201ENST00000364266 108 ntBASIC6.14□□□□□ -1.43
YBX1P67809 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 RNU6-253P-201ENST00000384730 105 ntBASIC6.14□□□□□ -1.43
YBX1P67809 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
YBX1P67809 AL035419.1-201ENST00000397037 564 ntBASIC6.14□□□□□ -1.43
YBX1P67809 RPL10P10-201ENST00000403509 664 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL512430.2-201ENST00000406786 339 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC016769.2-201ENST00000414815 475 ntBASIC6.14□□□□□ -1.43
YBX1P67809 RPL21P50-201ENST00000417698 477 ntBASIC6.14□□□□□ -1.43
YBX1P67809 THEM7P-201ENST00000419556 672 ntBASIC6.14□□□□□ -1.43
YBX1P67809 MTCO3P1-205ENST00000422088 832 ntBASIC6.14□□□□□ -1.43
YBX1P67809 OR6K4P-201ENST00000423179 955 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 VN1R20P-201ENST00000425215 966 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL389925.1-201ENST00000432257 728 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.14□□□□□ -1.43
YBX1P67809 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 ST13P20-201ENST00000447996 1065 ntBASIC6.14□□□□□ -1.43
YBX1P67809 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 AC144530.1-201ENST00000452862 555 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 RPSAP39-201ENST00000467439 883 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC041039.1-201ENST00000485656 536 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 HMGB3P13-201ENST00000511263 607 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 AC023968.1-201ENST00000560719 475 ntBASIC6.14□□□□□ -1.43
YBX1P67809 NPM1P47-201ENST00000560843 856 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.14□□□□□ -1.43
YBX1P67809 MTCO1P40-201ENST00000574371 625 ntBASIC6.14□□□□□ -1.43
YBX1P67809 OR1E3-201ENST00000575608 948 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 AC005332.4-201ENST00000592752 579 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL589863.1-201ENST00000595383 631 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 BMS1P7-201ENST00000602440 1052 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC018714.1-201ENST00000605028 208 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.14□□□□□ -1.43
YBX1P67809 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 AC025594.3-201ENST00000613068 790 ntBASIC6.14□□□□□ -1.43
YBX1P67809 AC073569.3-201ENST00000619055 682 ntBASIC6.14□□□□□ -1.43
YBX1P67809 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.14□□□□□ -1.43
YBX1P67809 MTCO1P18-201ENST00000455518 1419 ntBASIC6.14□□□□□ -1.43
YBX1P67809 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
YBX1P67809 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms