Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL39P62891 AC092647.2-201ENST00000452998 253 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC019084.1-201ENST00000457337 432 ntBASIC3.33□□□□□ -1.88
RPL39P62891 RN7SL97P-201ENST00000486780 299 ntBASIC3.33□□□□□ -1.88
RPL39P62891 HMGN2P25-201ENST00000486956 268 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 COX6B1P5-201ENST00000509843 249 ntBASIC3.33□□□□□ -1.88
RPL39P62891 RNA5SP43-201ENST00000516559 110 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 OR7E128P-201ENST00000532736 1024 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC3.33□□□□□ -1.88
RPL39P62891 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AC007066.2-202ENST00000566531 914 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 AC134669.1-201ENST00000581275 672 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AP000919.1-201ENST00000582850 985 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC095055.1-201ENST00000603472 1113 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC087283.1-201ENST00000604029 1074 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC010424.2-201ENST00000607594 443 ntBASIC3.33□□□□□ -1.88
RPL39P62891 RNA5SP440-201ENST00000612665 119 ntBASIC3.33□□□□□ -1.88
RPL39P62891 AC007204.2-201ENST00000615022 616 ntBASIC3.33□□□□□ -1.88
RPL39P62891 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AC048341.3-201ENST00000619323 491 ntBASIC3.33□□□□□ -1.88
RPL39P62891 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL39P62891 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RPL39P62891 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
RPL39P62891 AL355852.1-201ENST00000454081 1771 ntBASIC3.33□□□□□ -1.88
RPL39P62891 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC3.33□□□□□ -1.88
RPL39P62891 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPL39P62891 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL39P62891 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
RPL39P62891 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL39P62891 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RPL39P62891 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 OR56B2P-201ENST00000317102 954 ntBASIC3.32□□□□□ -1.88
RPL39P62891 RN7SKP187-201ENST00000365536 330 ntBASIC3.32□□□□□ -1.88
RPL39P62891 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPL39P62891 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPL39P62891 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 DDX39BP1-205ENST00000422507 192 ntBASIC3.32□□□□□ -1.88
RPL39P62891 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
RPL39P62891 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.32□□□□□ -1.88
RPL39P62891 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AL137845.2-201ENST00000444292 988 ntBASIC3.32□□□□□ -1.88
RPL39P62891 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 AC084754.1-201ENST00000463466 464 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AP000942.1-201ENST00000463969 747 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC090142.2-201ENST00000483263 416 ntBASIC3.32□□□□□ -1.88
RPL39P62891 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.32□□□□□ -1.88
RPL39P62891 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 GLRXP2-201ENST00000555594 321 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AL390334.1-201ENST00000556395 450 ntBASIC3.32□□□□□ -1.88
RPL39P62891 MIR4433B-201ENST00000581329 102 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AC233280.2-201ENST00000603917 1070 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AL121932.1-201ENST00000605542 214 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.32□□□□□ -1.88
RPL39P62891 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 SNX18P1Y-201ENST00000616231 511 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC023509.5-201ENST00000617434 807 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC099494.2-201ENST00000623371 978 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AP002505.2-201ENST00000623585 696 ntBASIC3.32□□□□□ -1.88
RPL39P62891 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RPL39P62891 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RPL39P62891 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 AC104118.1-201ENST00000607625 1589 ntBASIC3.32□□□□□ -1.88
RPL39P62891 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RPL39P62891 Z95327.2-201ENST00000414579 1873 ntBASIC3.32□□□□□ -1.88
RPL39P62891 TLK1P1-201ENST00000456760 2440 ntBASIC3.32□□□□□ -1.88
RPL39P62891 AC007382.1-201ENST00000624376 2618 ntBASIC3.32□□□□□ -1.88
RPL39P62891 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms