Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VSX2P58304 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VSX2P58304 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.82□□□□□ -1.64
VSX2P58304 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 SNORA70.10-201ENST00000384515 134 ntBASIC4.81□□□□□ -1.64
VSX2P58304 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
VSX2P58304 RN7SKP125-201ENST00000410481 302 ntBASIC4.81□□□□□ -1.64
VSX2P58304 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 AL137845.2-201ENST00000444292 988 ntBASIC4.81□□□□□ -1.64
VSX2P58304 SUMO2P1-206ENST00000445436 284 ntBASIC4.81□□□□□ -1.64
VSX2P58304 TRY2P-201ENST00000448860 689 ntBASIC4.81□□□□□ -1.64
VSX2P58304 OTX2P1-201ENST00000450956 354 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 RN7SL319P-201ENST00000480656 221 ntBASIC4.81□□□□□ -1.64
VSX2P58304 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.81□□□□□ -1.64
VSX2P58304 MYL12BP2-201ENST00000503948 512 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.81□□□□□ -1.64
VSX2P58304 RNA5SP43-201ENST00000516559 110 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AP000676.2-201ENST00000529711 301 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AC005000.1-201ENST00000536192 288 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.81□□□□□ -1.64
VSX2P58304 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 OR1F2P-201ENST00000570470 933 ntBASIC4.81□□□□□ -1.64
VSX2P58304 DPRXP4-201ENST00000578053 568 ntBASIC4.81□□□□□ -1.64
VSX2P58304 MIR4436B2-201ENST00000581415 91 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AP005262.1-201ENST00000582646 997 ntBASIC4.81□□□□□ -1.64
VSX2P58304 MIR4436B1-201ENST00000583272 91 ntBASIC4.81□□□□□ -1.64
VSX2P58304 MIR3936-201ENST00000584304 110 ntBASIC4.81□□□□□ -1.64
VSX2P58304 EIF1P5-201ENST00000585002 234 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AP002884.5-201ENST00000595053 1132 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.81□□□□□ -1.64
VSX2P58304 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.81□□□□□ -1.64
VSX2P58304 AC108359.1-201ENST00000616451 1211 ntBASIC4.81□□□□□ -1.64
VSX2P58304 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 CDC27P2-201ENST00000425026 1922 ntBASIC4.81□□□□□ -1.64
VSX2P58304 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
VSX2P58304 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AC007996.1-201ENST00000620414 2821 ntBASIC4.81□□□□□ -1.64
VSX2P58304 AC112255.1-201ENST00000624070 2493 ntBASIC4.81□□□□□ -1.64
VSX2P58304 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.81□□□□□ -1.64
VSX2P58304 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
VSX2P58304 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
VSX2P58304 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 TTC39DP-201ENST00000416781 1688 ntBASIC4.8□□□□□ -1.64
VSX2P58304 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 RN7SKP104-201ENST00000362605 328 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AC007618.1-201ENST00000366455 732 ntBASIC4.8□□□□□ -1.64
VSX2P58304 Z97832.1-201ENST00000402490 328 ntBASIC4.8□□□□□ -1.64
VSX2P58304 SETP10-201ENST00000424368 814 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AL590762.4-201ENST00000425885 253 ntBASIC4.8□□□□□ -1.64
VSX2P58304 HSPE1P16-201ENST00000426640 348 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 OR7E125P-201ENST00000443450 846 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AL645937.3-201ENST00000453647 936 ntBASIC4.8□□□□□ -1.64
VSX2P58304 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.8□□□□□ -1.64
VSX2P58304 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.8□□□□□ -1.64
VSX2P58304 RPS23P1-201ENST00000491662 432 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AC005412.2-201ENST00000492004 341 ntBASIC4.8□□□□□ -1.64
VSX2P58304 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 AL049874.2-201ENST00000492636 288 ntBASIC4.8□□□□□ -1.64
VSX2P58304 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.8□□□□□ -1.64
VSX2P58304 AC140172.1-201ENST00000502928 141 ntBASIC4.8□□□□□ -1.64
VSX2P58304 NIFKP7-201ENST00000503365 834 ntBASIC4.8□□□□□ -1.64
VSX2P58304 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VSX2P58304 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 AL671862.1-201ENST00000515851 349 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.8□□□□□ -1.64
VSX2P58304 NDUFB4P11-201ENST00000560510 395 ntBASIC4.8□□□□□ -1.64
VSX2P58304 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.8□□□□□ -1.64
VSX2P58304 MEMO1P5-201ENST00000604810 406 ntBASIC4.8□□□□□ -1.64
VSX2P58304 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.8□□□□□ -1.64
VSX2P58304 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms