Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.59□□□□□ -1.51
VCPP55072 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
VCPP55072 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
VCPP55072 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
VCPP55072 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.59□□□□□ -1.52
VCPP55072 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
VCPP55072 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.58□□□□□ -1.52
VCPP55072 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 OR55B1P-203ENST00000641518 2602 ntBASIC5.58□□□□□ -1.52
VCPP55072 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 RNA5SP479-201ENST00000364858 117 ntBASIC5.58□□□□□ -1.52
VCPP55072 GAPDHP15-201ENST00000398586 975 ntBASIC5.58□□□□□ -1.52
VCPP55072 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.58□□□□□ -1.52
VCPP55072 PTP4A1P1-201ENST00000420539 515 ntBASIC5.58□□□□□ -1.52
VCPP55072 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.58□□□□□ -1.52
VCPP55072 RPL12P17-201ENST00000432393 498 ntBASIC5.58□□□□□ -1.52
VCPP55072 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.58□□□□□ -1.52
VCPP55072 AC234781.3-201ENST00000452540 973 ntBASIC5.58□□□□□ -1.52
VCPP55072 AC009127.1-201ENST00000467090 155 ntBASIC5.58□□□□□ -1.52
VCPP55072 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VCPP55072 AC026979.1-201ENST00000492525 396 ntBASIC5.58□□□□□ -1.52
VCPP55072 RPL37AP8-201ENST00000494116 276 ntBASIC5.58□□□□□ -1.52
VCPP55072 RPS24P16-201ENST00000497294 392 ntBASIC5.58□□□□□ -1.52
VCPP55072 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 HMGB1P44-201ENST00000508597 572 ntBASIC5.58□□□□□ -1.52
VCPP55072 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.58□□□□□ -1.52
VCPP55072 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.58□□□□□ -1.52
VCPP55072 AC027369.5-201ENST00000533838 755 ntBASIC5.58□□□□□ -1.52
VCPP55072 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 PARP1P2-201ENST00000556806 195 ntBASIC5.58□□□□□ -1.52
VCPP55072 AC011447.4-201ENST00000587562 111 ntBASIC5.58□□□□□ -1.52
VCPP55072 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.58□□□□□ -1.52
VCPP55072 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VCPP55072 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 AC079298.1-201ENST00000625026 1619 ntBASIC5.57□□□□□ -1.52
VCPP55072 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 MIR137-201ENST00000385223 102 ntBASIC5.57□□□□□ -1.52
VCPP55072 AC124944.2-201ENST00000429866 1242 ntBASIC5.57□□□□□ -1.52
VCPP55072 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.57□□□□□ -1.52
VCPP55072 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.57□□□□□ -1.52
VCPP55072 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.57□□□□□ -1.52
VCPP55072 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.57□□□□□ -1.52
VCPP55072 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VCPP55072 AL672138.1-201ENST00000450604 1015 ntBASIC5.57□□□□□ -1.52
VCPP55072 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.57□□□□□ -1.52
VCPP55072 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.57□□□□□ -1.52
VCPP55072 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.57□□□□□ -1.52
VCPP55072 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 MIR4270-201ENST00000581799 70 ntBASIC5.57□□□□□ -1.52
VCPP55072 RN7SL356P-201ENST00000582228 248 ntBASIC5.57□□□□□ -1.52
VCPP55072 AC060766.1-201ENST00000590824 627 ntBASIC5.57□□□□□ -1.52
VCPP55072 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 AP001542.1-201ENST00000591314 200 ntBASIC5.57□□□□□ -1.52
VCPP55072 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 EIF3FP1-201ENST00000613970 806 ntBASIC5.57□□□□□ -1.52
VCPP55072 AL354950.1-201ENST00000614150 568 ntBASIC5.57□□□□□ -1.52
VCPP55072 AC068831.8-201ENST00000620171 435 ntBASIC5.57□□□□□ -1.52
VCPP55072 AC091932.2-201ENST00000623014 291 ntBASIC5.57□□□□□ -1.52
VCPP55072 AP003400.3-201ENST00000624904 346 ntBASIC5.57□□□□□ -1.52
VCPP55072 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 FRG1EP-201ENST00000634469 770 ntBASIC5.57□□□□□ -1.52
VCPP55072 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
VCPP55072 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
VCPP55072 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VCPP55072 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
VCPP55072 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
VCPP55072 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms