Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 AL158152.1-201ENST00000602652 1435 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC022905.1-201ENST00000503430 3048 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EPHB3P54753 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EPHB3P54753 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 Y_RNA.248-201ENST00000364501 109 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 CHMP1B2P-201ENST00000399581 597 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 MTCO1P56-201ENST00000401674 224 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 ERHP2-201ENST00000402323 299 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RN7SKP161-201ENST00000411110 305 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 AL161449.1-201ENST00000414531 1199 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 NPM1P11-201ENST00000417106 855 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RPL36P18-201ENST00000419316 318 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 MTCO2P34-201ENST00000421994 607 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AL512593.1-201ENST00000444758 779 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AL161636.2-201ENST00000445179 927 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 AL592447.1-201ENST00000447592 540 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 SEPT7P3-201ENST00000455017 621 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RN7SL174P-201ENST00000475578 289 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RPL30P6-201ENST00000475925 342 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RPL9P33-201ENST00000484311 566 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 RN7SL101P-201ENST00000496350 279 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC096754.1-201ENST00000508904 818 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 ST13P12-201ENST00000508958 1094 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 OR5H4P-201ENST00000510851 923 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AP005639.1-201ENST00000526939 192 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AP000648.1-201ENST00000529682 397 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 OR6M2P-201ENST00000529831 871 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 PCNAP4-201ENST00000532690 730 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 RNU4ATAC-201ENST00000580972 127 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 COX6CP7-201ENST00000597056 208 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 VN1R82P-201ENST00000601481 356 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 MTCYBP22-201ENST00000603788 447 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 AC128687.2-201ENST00000609657 566 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 AC008083.4-201ENST00000615076 444 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 OR1S1-201ENST00000624470 978 ntBASIC6.36□□□□□ -1.39
EPHB3P54753 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
EPHB3P54753 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
EPHB3P54753 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.36□□□□□ -1.39
EPHB3P54753 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
EPHB3P54753 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.36□□□□□ -1.39
EPHB3P54753 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
EPHB3P54753 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
EPHB3P54753 WDR95P-201ENST00000425638 1542 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
EPHB3P54753 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.35□□□□□ -1.39
EPHB3P54753 AC096921.2-201ENST00000561507 1916 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
EPHB3P54753 MIR323A-201ENST00000362199 86 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 SNORD116.1-201ENST00000365628 92 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AL590084.2-201ENST00000401481 382 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.35□□□□□ -1.39
EPHB3P54753 RPL35AP3-201ENST00000414680 288 ntBASIC6.35□□□□□ -1.39
EPHB3P54753 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms