Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK2P53671 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LIMK2P53671 AC093849.1-201ENST00000563631 2209 ntBASIC5.15□□□□□ -1.58
LIMK2P53671 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
LIMK2P53671 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LIMK2P53671 RNU6-697P-201ENST00000363348 107 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 RPL10P10-201ENST00000403509 664 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 AC244453.4-201ENST00000419150 388 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 AL590762.4-201ENST00000425885 253 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 PSMD10P3-201ENST00000437000 448 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK2P53671 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK2P53671 MRPL35P2-201ENST00000448009 511 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 AC069304.1-201ENST00000491593 704 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.15□□□□□ -1.59
LIMK2P53671 NDUFB5P1-201ENST00000508134 564 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 RN7SKP66-201ENST00000516681 231 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 AC012400.1-201ENST00000518452 381 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC024940.3-201ENST00000538551 316 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK2P53671 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC005229.3-201ENST00000603438 323 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 GMCL1P2-201ENST00000605230 823 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.15□□□□□ -1.59
LIMK2P53671 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
LIMK2P53671 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 AC063976.2-201ENST00000425667 3556 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK2P53671 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.15□□□□□ -1.59
LIMK2P53671 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 AL138820.1-201ENST00000617901 5305 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK2P53671 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.15□□□□□ -1.59
LIMK2P53671 CASC19-221ENST00000641309 1382 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LIMK2P53671 AL731532.2-201ENST00000623542 1953 ntBASIC5.15□□□□□ -1.59
LIMK2P53671 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK2P53671 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
LIMK2P53671 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AC093162.1-201ENST00000419682 124 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK2P53671 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 RCC2P2-201ENST00000422174 918 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 RPS29P10-201ENST00000439197 166 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 GTF3AP5-201ENST00000442645 697 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK2P53671 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 Z92846.1-201ENST00000456203 268 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK2P53671 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.14□□□□□ -1.59
LIMK2P53671 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AC105031.1-201ENST00000518550 476 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 OR5D15P-201ENST00000531671 942 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LIMK2P53671 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.14□□□□□ -1.59
LIMK2P53671 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.14□□□□□ -1.59
LIMK2P53671 AC011447.4-201ENST00000587562 111 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AP002884.5-201ENST00000595053 1132 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 BNIP3P7-201ENST00000605641 516 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AP005432.2-201ENST00000608162 586 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 AC020658.4-201ENST00000613987 684 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 OR8G7P-201ENST00000616658 848 ntBASIC5.14□□□□□ -1.59
LIMK2P53671 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.14□□□□□ -1.59
LIMK2P53671 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
LIMK2P53671 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LIMK2P53671 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIMK2P53671 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
LIMK2P53671 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LIMK2P53671 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LIMK2P53671 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK2P53671 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
LIMK2P53671 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK2P53671 OR9K1P-202ENST00000641111 3217 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK2P53671 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIMK2P53671 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.13□□□□□ -1.59
LIMK2P53671 RN7SKP126-201ENST00000411143 300 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.13□□□□□ -1.59
LIMK2P53671 EI24P4-201ENST00000423683 1078 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 MTCO1P51-201ENST00000427672 1060 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 COX6CP13-201ENST00000428703 226 ntBASIC5.13□□□□□ -1.59
LIMK2P53671 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms