Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.64□□□□□ -1.51
CLCN3P51790 AC006453.5-201ENST00000636451 619 ntBASIC5.64□□□□□ -1.51
CLCN3P51790 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CLCN3P51790 SCARNA15-201ENST00000607520 4325 ntBASIC5.64□□□□□ -1.51
CLCN3P51790 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.64□□□□□ -1.51
CLCN3P51790 GVINP1-202ENST00000531871 7271 ntBASIC5.64□□□□□ -1.51
CLCN3P51790 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN3P51790 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN3P51790 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CLCN3P51790 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.64□□□□□ -1.51
CLCN3P51790 AC007996.1-201ENST00000620414 2821 ntBASIC5.64□□□□□ -1.51
CLCN3P51790 CASC19-260ENST00000641828 2001 ntBASIC5.64□□□□□ -1.51
CLCN3P51790 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC018628.1-201ENST00000624147 3819 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.63□□□□□ -1.51
CLCN3P51790 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 RPL5P2-201ENST00000429598 854 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 BX276092.6-201ENST00000430476 250 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 RPL31P44-201ENST00000447680 377 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 BUD31P2-201ENST00000449374 300 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 CCRL1P1-201ENST00000449542 1053 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 BX276092.8-201ENST00000455722 250 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC108751.3-201ENST00000461814 1020 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 COX6B1P2-201ENST00000489624 230 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 IGLV2-34-201ENST00000490007 283 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC105233.1-201ENST00000498840 781 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC140172.1-201ENST00000502928 141 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 BTF3P13-201ENST00000513224 490 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC097486.1-201ENST00000515331 210 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 RNA5SP43-201ENST00000516559 110 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC008033.2-201ENST00000542626 177 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC090079.2-201ENST00000575289 768 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 RN7SL290P-201ENST00000578661 300 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.63□□□□□ -1.51
CLCN3P51790 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.63□□□□□ -1.51
CLCN3P51790 AL136295.6-201ENST00000610486 658 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 RNA5SP439-201ENST00000617595 124 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CLCN3P51790 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
CLCN3P51790 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 AL356317.1-201ENST00000396110 1436 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLCN3P51790 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CLCN3P51790 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CLCN3P51790 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 AC245100.2-201ENST00000454544 1679 ntBASIC5.63□□□□□ -1.51
CLCN3P51790 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CLCN3P51790 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CLCN3P51790 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 Y_RNA.110-201ENST00000363220 99 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 COX6B1P1-201ENST00000415962 213 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.62□□□□□ -1.51
CLCN3P51790 AL360081.1-201ENST00000428299 555 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 EIF2S2P3-201ENST00000428356 999 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.62□□□□□ -1.51
CLCN3P51790 AL590399.4-201ENST00000436561 601 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLCN3P51790 AC074367.1-201ENST00000438685 1125 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 AC006466.1-201ENST00000438721 289 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 IGHV5-78-201ENST00000450948 295 ntBASIC5.62□□□□□ -1.51
CLCN3P51790 EIF2S2P4-201ENST00000461070 984 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms