Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TRIM23P36406 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM23P36406 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM23P36406 RNU4-4P-201ENST00000364588 130 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 AL589647.1-201ENST00000402485 466 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 RN7SKP125-201ENST00000410481 302 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM23P36406 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 HSPD1P12-201ENST00000429127 1069 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 RPS27P18-201ENST00000431701 247 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 OTX2P1-201ENST00000450956 354 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM23P36406 RPS6P2-201ENST00000454208 705 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 HMGN1P8-201ENST00000463578 288 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC004980.4-201ENST00000513375 203 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 RN7SKP147-201ENST00000517154 244 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM23P36406 OR7M1P-201ENST00000608946 533 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AC093799.2-201ENST00000610062 578 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 AC090510.2-201ENST00000617465 629 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AL158062.1-201ENST00000619632 745 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 MIR6839-201ENST00000620425 113 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 NXF4-202ENST00000416098 1465 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 AC120338.1-201ENST00000625074 1541 ntBASIC5.12□□□□□ -1.59
TRIM23P36406 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM23P36406 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM23P36406 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM23P36406 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM23P36406 MTCO1P51-201ENST00000427672 1060 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM23P36406 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 AC092647.3-201ENST00000443044 633 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 MTND6P32-201ENST00000457611 483 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM23P36406 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM23P36406 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM23P36406 AP000676.2-201ENST00000529711 301 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 EIF4A2P5-201ENST00000529914 499 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 DUX4L52-201ENST00000549363 777 ntBASIC5.11□□□□□ -1.59
TRIM23P36406 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM23P36406 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM23P36406 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM23P36406 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM23P36406 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM23P36406 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM23P36406 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM23P36406 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM23P36406 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms