Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RPA3P35244 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 AC093849.1-201ENST00000563631 2209 ntBASIC4.95□□□□□ -1.62
RPA3P35244 SNORA66-201ENST00000384792 133 ntBASIC4.95□□□□□ -1.62
RPA3P35244 RN7SKP114-201ENST00000410327 279 ntBASIC4.95□□□□□ -1.62
RPA3P35244 RNU4-34P-201ENST00000410431 124 ntBASIC4.95□□□□□ -1.62
RPA3P35244 RANP7-201ENST00000418085 644 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 FABP7P1-201ENST00000424004 391 ntBASIC4.95□□□□□ -1.62
RPA3P35244 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RPA3P35244 AC026348.1-201ENST00000462549 1053 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AC005532.2-201ENST00000467154 373 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.95□□□□□ -1.62
RPA3P35244 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AC026688.1-201ENST00000520639 1168 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.95□□□□□ -1.62
RPA3P35244 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.95□□□□□ -1.62
RPA3P35244 AC087477.6-201ENST00000559595 843 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.95□□□□□ -1.62
RPA3P35244 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.95□□□□□ -1.62
RPA3P35244 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.95□□□□□ -1.62
RPA3P35244 AC097505.1-201ENST00000610199 565 ntBASIC4.95□□□□□ -1.62
RPA3P35244 SDR42E1P1-201ENST00000611327 477 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AC015660.5-201ENST00000623238 564 ntBASIC4.95□□□□□ -1.62
RPA3P35244 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
RPA3P35244 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 ICE2P1-201ENST00000512800 1849 ntBASIC4.95□□□□□ -1.62
RPA3P35244 AL034370.1-201ENST00000397254 1590 ntBASIC4.95□□□□□ -1.62
RPA3P35244 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPA3P35244 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPA3P35244 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 RNU1-83P-201ENST00000363426 164 ntBASIC4.94□□□□□ -1.62
RPA3P35244 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 SNORA70.10-201ENST00000384515 134 ntBASIC4.94□□□□□ -1.62
RPA3P35244 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPA3P35244 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 ATP5HP3-201ENST00000396994 486 ntBASIC4.94□□□□□ -1.62
RPA3P35244 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.94□□□□□ -1.62
RPA3P35244 RN7SKP273-201ENST00000411392 314 ntBASIC4.94□□□□□ -1.62
RPA3P35244 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.94□□□□□ -1.62
RPA3P35244 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.94□□□□□ -1.62
RPA3P35244 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.94□□□□□ -1.62
RPA3P35244 SCAND3P1-201ENST00000439854 1060 ntBASIC4.94□□□□□ -1.62
RPA3P35244 RPS26P2-201ENST00000440331 348 ntBASIC4.94□□□□□ -1.62
RPA3P35244 EEF1B2P5-201ENST00000444820 548 ntBASIC4.94□□□□□ -1.62
RPA3P35244 MRPL48P1-201ENST00000445390 636 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AC092647.2-201ENST00000452998 253 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 RN7SL517P-201ENST00000462240 305 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AC097484.1-201ENST00000471148 389 ntBASIC4.94□□□□□ -1.62
RPA3P35244 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
RPA3P35244 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 RN7SKP66-201ENST00000516681 231 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 AC092490.3-201ENST00000545370 572 ntBASIC4.94□□□□□ -1.62
RPA3P35244 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.94□□□□□ -1.62
RPA3P35244 MIR3691-201ENST00000578066 90 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.94□□□□□ -1.62
RPA3P35244 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.94□□□□□ -1.62
RPA3P35244 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.94□□□□□ -1.62
RPA3P35244 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AL139041.1-201ENST00000605480 610 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AL139407.1-201ENST00000613826 1175 ntBASIC4.94□□□□□ -1.62
RPA3P35244 OR8G7P-201ENST00000616658 848 ntBASIC4.94□□□□□ -1.62
RPA3P35244 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPA3P35244 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPA3P35244 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RPA3P35244 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPA3P35244 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPA3P35244 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.93□□□□□ -1.62
RPA3P35244 SNORD96B-201ENST00000386148 79 ntBASIC4.93□□□□□ -1.62
RPA3P35244 RN7SKP199-201ENST00000410325 305 ntBASIC4.93□□□□□ -1.62
RPA3P35244 E2F6P2-201ENST00000420708 748 ntBASIC4.93□□□□□ -1.62
RPA3P35244 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.93□□□□□ -1.62
RPA3P35244 DDX39BP1-205ENST00000422507 192 ntBASIC4.93□□□□□ -1.62
RPA3P35244 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.93□□□□□ -1.62
RPA3P35244 AC092162.1-201ENST00000432828 434 ntBASIC4.93□□□□□ -1.62
RPA3P35244 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC4.93□□□□□ -1.62
RPA3P35244 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.93□□□□□ -1.62
RPA3P35244 RN7SL214P-201ENST00000487317 265 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms