Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC8P31273 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 AC013470.3-201ENST00000420252 1194 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 RPL7AP49-201ENST00000429522 581 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 AC009238.2-201ENST00000431026 355 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 MTCO1P45-201ENST00000431457 267 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AL591438.1-201ENST00000433508 581 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC8P31273 PRPF38AP2-201ENST00000438179 851 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 RPS29P9-201ENST00000440360 171 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC017099.1-201ENST00000448261 1028 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 OR52J1P-201ENST00000450596 932 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 AC107015.1-201ENST00000466902 747 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC8P31273 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 RN7SL346P-201ENST00000491561 294 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 CEACAMP10-202ENST00000495431 496 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC8P31273 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 SNRPGP1-201ENST00000553864 222 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 AC245128.3-201ENST00000594721 748 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC005520.3-201ENST00000602874 370 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC087283.1-201ENST00000604029 1074 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC084036.1-201ENST00000609190 508 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 AL138960.1-201ENST00000613838 513 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.61□□□□□ -1.51
HOXC8P31273 RMST_5.1-201ENST00000618704 126 ntBASIC5.61□□□□□ -1.51
HOXC8P31273 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.61□□□□□ -1.51
HOXC8P31273 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC8P31273 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.61□□□□□ -1.51
HOXC8P31273 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC8P31273 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 AL031595.2-201ENST00000624215 19071 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC125336.1-201ENST00000508893 2827 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC079741.1-201ENST00000321498 212 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 RN7SKP113-201ENST00000363891 295 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 RNU6-1251P-201ENST00000364502 107 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HOXC8P31273 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 ATP5HP3-201ENST00000396994 486 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 ST13P16-201ENST00000401760 781 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 SNORA77-201ENST00000408716 125 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXC8P31273 RN7SKP100-201ENST00000411258 284 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 NPM1P40-201ENST00000412758 733 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 FAM204CP-201ENST00000424489 642 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 MTND4LP13-201ENST00000425022 298 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AC021876.1-201ENST00000425959 359 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 MTCO1P57-201ENST00000432182 261 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXC8P31273 RPL5P25-201ENST00000441148 775 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 BTBD7P2-201ENST00000441962 620 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC8P31273 AL137845.2-201ENST00000444292 988 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AC009220.1-201ENST00000451614 275 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AL049829.1-201ENST00000465411 156 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 AC096741.1-201ENST00000472250 846 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 AC010350.1-201ENST00000504908 231 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.6□□□□□ -1.51
HOXC8P31273 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC8P31273 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC8P31273 GSTP1P1-201ENST00000548078 319 ntBASIC5.6□□□□□ -1.51
HOXC8P31273 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXC8P31273 AC079075.1-201ENST00000559543 878 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms