Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.74□□□□□ -1.65
COL5A1P20908 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.74□□□□□ -1.65
COL5A1P20908 AC020915.5-201ENST00000596836 964 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 AC010424.2-201ENST00000607594 443 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 MIR6853-201ENST00000619642 74 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL5A1P20908 RNA5SP397-201ENST00000391323 118 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 AL390316.1-201ENST00000406279 553 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 AL359073.1-201ENST00000448036 403 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 RNU2-30P-201ENST00000516209 141 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.74□□□□□ -1.65
COL5A1P20908 VN1R85P-201ENST00000601587 426 ntBASIC4.74□□□□□ -1.65
COL5A1P20908 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL5A1P20908 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL5A1P20908 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
COL5A1P20908 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 AL137058.3-201ENST00000624531 3099 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.73□□□□□ -1.65
COL5A1P20908 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 RNU1-85P-201ENST00000364127 164 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 SNORA5.1-201ENST00000384275 131 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 SNORA37-201ENST00000384504 129 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL5A1P20908 U3.22-201ENST00000391120 215 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 OR51B3P-201ENST00000412287 913 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 AC023141.6-201ENST00000429418 337 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.73□□□□□ -1.65
COL5A1P20908 ENPP7P11-201ENST00000505915 627 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 OR8G5-201ENST00000524943 1041 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.73□□□□□ -1.65
COL5A1P20908 NPM1P5-201ENST00000557228 838 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.73□□□□□ -1.65
COL5A1P20908 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 RN7SL802P-201ENST00000577858 299 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 KPNA2P3-201ENST00000584190 848 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 AC005962.2-201ENST00000611427 652 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 AL450345.1-202ENST00000605741 3881 ntBASIC4.73□□□□□ -1.65
COL5A1P20908 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL5A1P20908 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL5A1P20908 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
COL5A1P20908 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 SMG1P6-201ENST00000532337 2930 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 COX5BP7-201ENST00000414780 274 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 LINC01881-201ENST00000416103 412 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 RPL12P34-201ENST00000424532 479 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A1P20908 Z95152.1-201ENST00000453556 656 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 snoU13.22-201ENST00000459428 104 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 AC108751.3-201ENST00000461814 1020 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL5A1P20908 AK3P4-201ENST00000504283 583 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.72□□□□□ -1.65
COL5A1P20908 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A1P20908 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.72□□□□□ -1.65
COL5A1P20908 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 AP001029.2-203ENST00000589795 4910 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.72□□□□□ -1.65
COL5A1P20908 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A1P20908 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.72□□□□□ -1.65
COL5A1P20908 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL5A1P20908 MIR133A2-201ENST00000347538 102 ntBASIC4.72□□□□□ -1.65
COL5A1P20908 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms