Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 HMGB1P20-201ENST00000402555 677 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC245060.4-201ENST00000413293 1121 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC066692.1-201ENST00000421721 457 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 REREP1Y-201ENST00000422655 198 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 HIGD1AP4-201ENST00000430194 280 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 BX119904.1-201ENST00000432026 348 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 REREP2Y-201ENST00000439103 200 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 MTCYBP21-201ENST00000443300 1113 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 MTND1P29-201ENST00000448112 647 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL358876.1-201ENST00000453364 1075 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 CBX1P2-201ENST00000453841 458 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC118758.1-202ENST00000454719 225 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC116562.1-201ENST00000485355 781 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC012123.2-201ENST00000485809 248 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 EIF4E2P2-201ENST00000492033 736 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL117692.1-201ENST00000494283 713 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC011853.1-201ENST00000518911 454 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AP000648.1-201ENST00000529682 397 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC107993.1-201ENST00000591343 684 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL031601.1-201ENST00000605702 394 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL022394.1-201ENST00000606979 292 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AP005431.1-201ENST00000618479 319 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 AC004943.3-201ENST00000624116 600 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 Z83820.1-201ENST00000456978 1499 ntBASIC5.06□□□□□ -1.6
TNFRSF1BP20333 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TNFRSF1BP20333 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 RNA5SP394-201ENST00000364216 119 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 RNA5SP131-201ENST00000365452 119 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 RNU6-481P-201ENST00000384194 107 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 MIR513B-201ENST00000385136 84 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 KRR1P1-201ENST00000419430 803 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AL035660.1-201ENST00000422041 222 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 BX119321.1-201ENST00000428912 797 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.05□□□□□ -1.6
TNFRSF1BP20333 VDAC2P4-201ENST00000452925 711 ntBASIC5.05□□□□□ -1.6
TNFRSF1BP20333 YRDCP3-201ENST00000456507 480 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 161 ms